Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 GPX1P1-201ENST00000388829 606 ntBASIC19.09■□□□□ 0.65
HCFC1P51610 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HCFC1P51610 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.09■□□□□ 0.65
HCFC1P51610 AC142086.2-201ENST00000569753 217 ntBASIC19.09■□□□□ 0.65
HCFC1P51610 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.09■□□□□ 0.65
HCFC1P51610 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCFC1P51610 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCFC1P51610 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCFC1P51610 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HCFC1P51610 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HCFC1P51610 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HCFC1P51610 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCFC1P51610 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
HCFC1P51610 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.08■□□□□ 0.65
HCFC1P51610 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HCFC1P51610 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HCFC1P51610 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HCFC1P51610 AC010141.3-201ENST00000456659 717 ntBASIC19.08■□□□□ 0.64
HCFC1P51610 AC011767.1-201ENST00000617410 1153 ntBASIC19.08■□□□□ 0.64
HCFC1P51610 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.08■□□□□ 0.64
HCFC1P51610 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HCFC1P51610 ESRRAP2-201ENST00000418437 1549 ntBASIC19.08■□□□□ 0.64
HCFC1P51610 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HCFC1P51610 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HCFC1P51610 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.07■□□□□ 0.64
HCFC1P51610 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HCFC1P51610 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HCFC1P51610 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HCFC1P51610 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HCFC1P51610 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.07■□□□□ 0.64
HCFC1P51610 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HCFC1P51610 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.07■□□□□ 0.64
HCFC1P51610 KRT87P-202ENST00000534226 1464 ntBASIC19.07■□□□□ 0.64
HCFC1P51610 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HCFC1P51610 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HCFC1P51610 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.07■□□□□ 0.64
HCFC1P51610 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.07■□□□□ 0.64
HCFC1P51610 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HCFC1P51610 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.07■□□□□ 0.64
HCFC1P51610 GUSBP6-202ENST00000438529 1198 ntBASIC19.07■□□□□ 0.64
HCFC1P51610 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.07■□□□□ 0.64
HCFC1P51610 UBE2DNL-204ENST00000602536 740 ntBASIC19.07■□□□□ 0.64
HCFC1P51610 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HCFC1P51610 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.06■□□□□ 0.64
HCFC1P51610 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HCFC1P51610 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HCFC1P51610 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HCFC1P51610 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.06■□□□□ 0.64
HCFC1P51610 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.06■□□□□ 0.64
HCFC1P51610 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.06■□□□□ 0.64
HCFC1P51610 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.06■□□□□ 0.64
HCFC1P51610 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.06■□□□□ 0.64
HCFC1P51610 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.05■□□□□ 0.64
HCFC1P51610 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.05■□□□□ 0.64
HCFC1P51610 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HCFC1P51610 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1P51610 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1P51610 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.04■□□□□ 0.64
HCFC1P51610 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.04■□□□□ 0.64
HCFC1P51610 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1P51610 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.04■□□□□ 0.64
HCFC1P51610 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HCFC1P51610 CNN2P6-201ENST00000439038 900 ntBASIC19.04■□□□□ 0.64
HCFC1P51610 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.04■□□□□ 0.64
HCFC1P51610 AC231657.2-201ENST00000624556 255 ntBASIC19.04■□□□□ 0.64
HCFC1P51610 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1P51610 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1P51610 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1P51610 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HCFC1P51610 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HCFC1P51610 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1P51610 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC1P51610 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.03■□□□□ 0.64
HCFC1P51610 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.03■□□□□ 0.64
HCFC1P51610 AC066615.1-201ENST00000640911 628 ntBASIC19.03■□□□□ 0.64
HCFC1P51610 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1P51610 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1P51610 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1P51610 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1P51610 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.03■□□□□ 0.64
HCFC1P51610 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1P51610 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1P51610 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1P51610 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1P51610 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.03■□□□□ 0.64
HCFC1P51610 AC079140.4-201ENST00000507448 529 ntBASIC19.03■□□□□ 0.64
HCFC1P51610 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.03■□□□□ 0.64
HCFC1P51610 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HCFC1P51610 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
HCFC1P51610 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1P51610 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1P51610 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HCFC1P51610 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms