Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CLCN1P35523 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLCN1P35523 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.64■■□□□ 1.54
CLCN1P35523 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CLCN1P35523 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.64■■□□□ 1.54
CLCN1P35523 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLCN1P35523 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.64■■□□□ 1.53
CLCN1P35523 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.64■■□□□ 1.53
CLCN1P35523 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLCN1P35523 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
CLCN1P35523 CD37-213ENST00000598095 1598 ntTSL 2 BASIC24.63■■□□□ 1.53
CLCN1P35523 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.63■■□□□ 1.53
CLCN1P35523 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CLCN1P35523 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC24.63■■□□□ 1.53
CLCN1P35523 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
CLCN1P35523 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.63■■□□□ 1.53
CLCN1P35523 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
CLCN1P35523 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
CLCN1P35523 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLCN1P35523 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.62■■□□□ 1.53
CLCN1P35523 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.62■■□□□ 1.53
CLCN1P35523 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN1P35523 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN1P35523 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.62■■□□□ 1.53
CLCN1P35523 THA1P-201ENST00000590384 1145 ntBASIC24.62■■□□□ 1.53
CLCN1P35523 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
CLCN1P35523 EML3-217ENST00000531557 2509 ntTSL 5 BASIC24.62■■□□□ 1.53
CLCN1P35523 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CLCN1P35523 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
CLCN1P35523 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CLCN1P35523 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
CLCN1P35523 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
CLCN1P35523 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
CLCN1P35523 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.61■■□□□ 1.53
CLCN1P35523 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.61■■□□□ 1.53
CLCN1P35523 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC24.61■■□□□ 1.53
CLCN1P35523 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
CLCN1P35523 AC131274.2-201ENST00000580697 1507 ntBASIC24.61■■□□□ 1.53
CLCN1P35523 KRT8P33-201ENST00000508125 1423 ntBASIC24.61■■□□□ 1.53
CLCN1P35523 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.6■■□□□ 1.53
CLCN1P35523 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
CLCN1P35523 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.6■■□□□ 1.53
CLCN1P35523 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 AF131216.4-201ENST00000638924 1588 ntBASIC24.6■■□□□ 1.53
CLCN1P35523 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.6■■□□□ 1.53
CLCN1P35523 MIR4281-201ENST00000580852 62 ntBASIC24.6■■□□□ 1.53
CLCN1P35523 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
CLCN1P35523 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
CLCN1P35523 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.6■■□□□ 1.53
CLCN1P35523 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
CLCN1P35523 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CLCN1P35523 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLCN1P35523 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CLCN1P35523 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLCN1P35523 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
CLCN1P35523 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
CLCN1P35523 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLCN1P35523 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.59■■□□□ 1.53
CLCN1P35523 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLCN1P35523 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CLCN1P35523 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN1P35523 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.58■■□□□ 1.53
CLCN1P35523 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN1P35523 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
CLCN1P35523 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN1P35523 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN1P35523 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.58■■□□□ 1.53
CLCN1P35523 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN1P35523 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.58■■□□□ 1.53
CLCN1P35523 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC24.58■■□□□ 1.53
CLCN1P35523 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.58■■□□□ 1.53
CLCN1P35523 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.58■■□□□ 1.53
CLCN1P35523 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
CLCN1P35523 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.58■■□□□ 1.53
CLCN1P35523 AC103724.3-201ENST00000564481 992 ntBASIC24.58■■□□□ 1.53
CLCN1P35523 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.58■■□□□ 1.53
CLCN1P35523 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
CLCN1P35523 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms