Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HOXC12P31275 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.23■□□□□ 0.67
HOXC12P31275 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HOXC12P31275 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 AP005435.1-201ENST00000529293 1178 ntBASIC19.23■□□□□ 0.67
HOXC12P31275 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
HOXC12P31275 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 DUSP8P3-201ENST00000399571 1760 ntBASIC19.23■□□□□ 0.67
HOXC12P31275 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HOXC12P31275 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
HOXC12P31275 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC12P31275 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.22■□□□□ 0.67
HOXC12P31275 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.22■□□□□ 0.67
HOXC12P31275 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 AC004911.1-201ENST00000416316 871 ntBASIC19.22■□□□□ 0.67
HOXC12P31275 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.22■□□□□ 0.67
HOXC12P31275 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC12P31275 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HOXC12P31275 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HOXC12P31275 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.22■□□□□ 0.67
HOXC12P31275 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
HOXC12P31275 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HOXC12P31275 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXC12P31275 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC12P31275 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.21■□□□□ 0.67
HOXC12P31275 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC12P31275 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HOXC12P31275 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC12P31275 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.21■□□□□ 0.67
HOXC12P31275 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HOXC12P31275 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.21■□□□□ 0.67
HOXC12P31275 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
HOXC12P31275 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HOXC12P31275 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC12P31275 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC12P31275 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC12P31275 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HOXC12P31275 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXC12P31275 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC12P31275 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXC12P31275 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.2■□□□□ 0.66
HOXC12P31275 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC12P31275 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXC12P31275 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXC12P31275 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC12P31275 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC12P31275 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
HOXC12P31275 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXC12P31275 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXC12P31275 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXC12P31275 AC123595.1-201ENST00000440769 1046 ntBASIC19.19■□□□□ 0.66
HOXC12P31275 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC12P31275 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC12P31275 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.19■□□□□ 0.66
HOXC12P31275 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXC12P31275 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXC12P31275 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC12P31275 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC12P31275 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXC12P31275 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC12P31275 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
HOXC12P31275 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC12P31275 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HOXC12P31275 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXC12P31275 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC12P31275 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC12P31275 DUSP8P5-201ENST00000422884 1815 ntBASIC19.18■□□□□ 0.66
HOXC12P31275 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC12P31275 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC12P31275 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC12P31275 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC12P31275 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC12P31275 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms