Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRD2P25440 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BRD2P25440 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
BRD2P25440 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
BRD2P25440 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD2P25440 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
BRD2P25440 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD2P25440 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD2P25440 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD2P25440 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD2P25440 AC127496.7-201ENST00000625110 1798 ntBASIC23.28■■□□□ 1.32
BRD2P25440 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD2P25440 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.28■■□□□ 1.32
BRD2P25440 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
BRD2P25440 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
BRD2P25440 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRD2P25440 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRD2P25440 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.27■■□□□ 1.32
BRD2P25440 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
BRD2P25440 AC080038.3-201ENST00000623346 1952 ntBASIC23.27■■□□□ 1.32
BRD2P25440 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.27■■□□□ 1.32
BRD2P25440 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
BRD2P25440 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 AL139246.5-201ENST00000606645 996 ntBASIC23.26■■□□□ 1.31
BRD2P25440 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.26■■□□□ 1.31
BRD2P25440 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
BRD2P25440 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
BRD2P25440 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BRD2P25440 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
BRD2P25440 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
BRD2P25440 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
BRD2P25440 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BRD2P25440 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
BRD2P25440 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
BRD2P25440 AL117328.2-201ENST00000624617 1940 ntBASIC23.24■■□□□ 1.31
BRD2P25440 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.24■■□□□ 1.31
BRD2P25440 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.24■■□□□ 1.31
BRD2P25440 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.24■■□□□ 1.31
BRD2P25440 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.24■■□□□ 1.31
BRD2P25440 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
BRD2P25440 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BRD2P25440 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
BRD2P25440 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
BRD2P25440 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
BRD2P25440 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
BRD2P25440 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.23■■□□□ 1.31
BRD2P25440 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
BRD2P25440 BX842568.3-201ENST00000418104 571 ntBASIC23.23■■□□□ 1.31
BRD2P25440 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD2P25440 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.23■■□□□ 1.31
BRD2P25440 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
BRD2P25440 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.23■■□□□ 1.31
BRD2P25440 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.23■■□□□ 1.31
BRD2P25440 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
BRD2P25440 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD2P25440 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD2P25440 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD2P25440 AC137767.1-201ENST00000602918 1920 ntBASIC23.23■■□□□ 1.31
BRD2P25440 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
BRD2P25440 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD2P25440 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
BRD2P25440 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.22■■□□□ 1.31
BRD2P25440 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
BRD2P25440 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
BRD2P25440 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD2P25440 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD2P25440 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD2P25440 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
BRD2P25440 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.22■■□□□ 1.31
BRD2P25440 AC008764.7-201ENST00000593779 1081 ntBASIC23.22■■□□□ 1.31
BRD2P25440 AL031432.3-201ENST00000607698 485 ntBASIC23.22■■□□□ 1.31
BRD2P25440 CA15P2-201ENST00000611168 834 ntBASIC23.22■■□□□ 1.31
BRD2P25440 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.22■■□□□ 1.31
BRD2P25440 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD2P25440 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD2P25440 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
BRD2P25440 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
BRD2P25440 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
BRD2P25440 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.21■■□□□ 1.31
BRD2P25440 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 AP001330.3-201ENST00000520123 633 ntBASIC23.21■■□□□ 1.31
BRD2P25440 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.21■■□□□ 1.31
BRD2P25440 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
BRD2P25440 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
BRD2P25440 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms