Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC079089.2-201ENST00000531211 1277 ntBASIC18.78■□□□□ 0.6
CCL1P22362 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.78■□□□□ 0.6
CCL1P22362 AC099791.2-201ENST00000605725 427 ntBASIC18.78■□□□□ 0.6
CCL1P22362 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CCL1P22362 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL1P22362 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL1P22362 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL1P22362 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL1P22362 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL1P22362 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL1P22362 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL1P22362 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL1P22362 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL1P22362 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CCL1P22362 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
CCL1P22362 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCL1P22362 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CCL1P22362 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCL1P22362 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL1P22362 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.77■□□□□ 0.6
CCL1P22362 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCL1P22362 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.77■□□□□ 0.59
CCL1P22362 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCL1P22362 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
CCL1P22362 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCL1P22362 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CCL1P22362 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL1P22362 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL1P22362 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL1P22362 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL1P22362 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.76■□□□□ 0.59
CCL1P22362 AC068587.7-201ENST00000641602 218 ntBASIC18.76■□□□□ 0.59
CCL1P22362 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL1P22362 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 AC244015.2-201ENST00000616358 1861 ntBASIC18.75■□□□□ 0.59
CCL1P22362 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 OR2I1P-207ENST00000453522 948 ntBASIC18.75■□□□□ 0.59
CCL1P22362 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.75■□□□□ 0.59
CCL1P22362 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.75■□□□□ 0.59
CCL1P22362 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL1P22362 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CCL1P22362 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL1P22362 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCL1P22362 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CCL1P22362 MIR3181-201ENST00000578512 73 ntBASIC18.74■□□□□ 0.59
CCL1P22362 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.74■□□□□ 0.59
CCL1P22362 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.74■□□□□ 0.59
CCL1P22362 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCL1P22362 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL1P22362 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.74■□□□□ 0.59
CCL1P22362 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.73■□□□□ 0.59
CCL1P22362 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL1P22362 AC026310.3-201ENST00000625186 2373 ntBASIC18.73■□□□□ 0.59
CCL1P22362 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL1P22362 AL512631.2-201ENST00000604634 923 ntBASIC18.73■□□□□ 0.59
CCL1P22362 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.73■□□□□ 0.59
CCL1P22362 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCL1P22362 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CCL1P22362 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCL1P22362 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.72■□□□□ 0.59
CCL1P22362 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.72■□□□□ 0.59
CCL1P22362 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.72■□□□□ 0.59
CCL1P22362 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CCL1P22362 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCL1P22362 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.72■□□□□ 0.59
CCL1P22362 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.72■□□□□ 0.59
CCL1P22362 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.72■□□□□ 0.59
CCL1P22362 AC092171.4-201ENST00000609130 632 ntBASIC18.72■□□□□ 0.59
CCL1P22362 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCL1P22362 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms