Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST1H1DP16402 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HIST1H1DP16402 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.44■□□□□ 0.54
HIST1H1DP16402 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.44■□□□□ 0.54
HIST1H1DP16402 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HIST1H1DP16402 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HIST1H1DP16402 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HIST1H1DP16402 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.43■□□□□ 0.54
HIST1H1DP16402 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIST1H1DP16402 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 KRT8P33-201ENST00000508125 1423 ntBASIC18.42■□□□□ 0.54
HIST1H1DP16402 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.42■□□□□ 0.54
HIST1H1DP16402 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIST1H1DP16402 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1DP16402 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1DP16402 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1DP16402 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1DP16402 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1DP16402 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIST1H1DP16402 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 AC021242.3-201ENST00000607598 1377 ntBASIC18.41■□□□□ 0.54
HIST1H1DP16402 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HIST1H1DP16402 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST1H1DP16402 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1DP16402 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1DP16402 AL031848.2-201ENST00000607670 837 ntBASIC18.4■□□□□ 0.54
HIST1H1DP16402 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1DP16402 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1DP16402 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1DP16402 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1DP16402 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HIST1H1DP16402 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST1H1DP16402 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST1H1DP16402 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.39■□□□□ 0.54
HIST1H1DP16402 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 AC009102.2-201ENST00000606772 1639 ntBASIC18.39■□□□□ 0.53
HIST1H1DP16402 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H1DP16402 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST1H1DP16402 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST1H1DP16402 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HIST1H1DP16402 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1DP16402 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HIST1H1DP16402 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1DP16402 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1DP16402 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1DP16402 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.38■□□□□ 0.53
HIST1H1DP16402 AC012354.3-201ENST00000623734 483 ntBASIC18.38■□□□□ 0.53
HIST1H1DP16402 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H1DP16402 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1DP16402 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H1DP16402 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1DP16402 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HIST1H1DP16402 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST1H1DP16402 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HIST1H1DP16402 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST1H1DP16402 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms