Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CHGAP10645 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC31.53■■■□□ 2.64
CHGAP10645 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CHGAP10645 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHGAP10645 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
CHGAP10645 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC31.52■■■□□ 2.64
CHGAP10645 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.52■■■□□ 2.64
CHGAP10645 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CHGAP10645 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
CHGAP10645 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC31.52■■■□□ 2.64
CHGAP10645 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.52■■■□□ 2.64
CHGAP10645 AL050303.2-201ENST00000619798 666 ntBASIC31.52■■■□□ 2.64
CHGAP10645 GAMT-205ENST00000640762 751 ntTSL 5 BASIC31.52■■■□□ 2.64
CHGAP10645 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
CHGAP10645 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CHGAP10645 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CHGAP10645 AL139125.2-201ENST00000623134 1869 ntBASIC31.52■■■□□ 2.64
CHGAP10645 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
CHGAP10645 DUSP8P3-201ENST00000399571 1760 ntBASIC31.51■■■□□ 2.64
CHGAP10645 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31.51■■■□□ 2.63
CHGAP10645 APTR-205ENST00000447009 902 ntTSL 2 BASIC31.51■■■□□ 2.63
CHGAP10645 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.51■■■□□ 2.63
CHGAP10645 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC31.51■■■□□ 2.63
CHGAP10645 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CHGAP10645 PXK-203ENST00000383715 1756 ntTSL 5 BASIC31.51■■■□□ 2.63
CHGAP10645 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.5■■■□□ 2.63
CHGAP10645 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
CHGAP10645 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31.5■■■□□ 2.63
CHGAP10645 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC31.5■■■□□ 2.63
CHGAP10645 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CHGAP10645 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CHGAP10645 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.5■■■□□ 2.63
CHGAP10645 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CHGAP10645 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CHGAP10645 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
CHGAP10645 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC31.49■■■□□ 2.63
CHGAP10645 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CHGAP10645 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.49■■■□□ 2.63
CHGAP10645 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CHGAP10645 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
CHGAP10645 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CHGAP10645 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC31.49■■■□□ 2.63
CHGAP10645 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHGAP10645 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHGAP10645 KRT87P-202ENST00000534226 1464 ntBASIC31.48■■■□□ 2.63
CHGAP10645 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHGAP10645 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CHGAP10645 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.48■■■□□ 2.63
CHGAP10645 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CHGAP10645 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
CHGAP10645 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CHGAP10645 AC083906.2-201ENST00000511578 360 ntBASIC31.47■■■□□ 2.63
CHGAP10645 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.47■■■□□ 2.63
CHGAP10645 UBE2DNL-204ENST00000602536 740 ntBASIC31.47■■■□□ 2.63
CHGAP10645 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC31.47■■■□□ 2.63
CHGAP10645 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.47■■■□□ 2.63
CHGAP10645 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHGAP10645 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHGAP10645 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CHGAP10645 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.46■■■□□ 2.63
CHGAP10645 CD99P1-205ENST00000527459 561 ntBASIC31.46■■■□□ 2.63
CHGAP10645 AL121832.2-201ENST00000610979 668 ntBASIC31.46■■■□□ 2.63
CHGAP10645 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
CHGAP10645 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CHGAP10645 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHGAP10645 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHGAP10645 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
CHGAP10645 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHGAP10645 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CHGAP10645 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.45■■■□□ 2.63
CHGAP10645 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.45■■■□□ 2.63
CHGAP10645 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.45■■■□□ 2.63
CHGAP10645 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHGAP10645 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CHGAP10645 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHGAP10645 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.45■■■□□ 2.62
CHGAP10645 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.44■■■□□ 2.62
CHGAP10645 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHGAP10645 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC31.44■■■□□ 2.62
CHGAP10645 DUX4L16-201ENST00000555130 1264 ntBASIC31.44■■■□□ 2.62
CHGAP10645 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CHGAP10645 TMEM191A-211ENST00000637163 1067 ntBASIC31.44■■■□□ 2.62
CHGAP10645 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHGAP10645 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHGAP10645 AC009237.3-201ENST00000393279 1427 ntBASIC31.43■■■□□ 2.62
CHGAP10645 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHGAP10645 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHGAP10645 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC31.43■■■□□ 2.62
CHGAP10645 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHGAP10645 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC31.43■■■□□ 2.62
CHGAP10645 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHGAP10645 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.43■■■□□ 2.62
CHGAP10645 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms