Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
UBCP0CG48 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBCP0CG48 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBCP0CG48 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.04■□□□□ 0.64
UBCP0CG48 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.04■□□□□ 0.64
UBCP0CG48 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.04■□□□□ 0.64
UBCP0CG48 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBCP0CG48 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBCP0CG48 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.03■□□□□ 0.64
UBCP0CG48 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.03■□□□□ 0.64
UBCP0CG48 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.03■□□□□ 0.64
UBCP0CG48 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBCP0CG48 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
UBCP0CG48 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBCP0CG48 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBCP0CG48 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.02■□□□□ 0.64
UBCP0CG48 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBCP0CG48 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBCP0CG48 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBCP0CG48 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBCP0CG48 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
UBCP0CG48 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
UBCP0CG48 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.01■□□□□ 0.63
UBCP0CG48 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBCP0CG48 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
UBCP0CG48 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.01■□□□□ 0.63
UBCP0CG48 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19■□□□□ 0.63
UBCP0CG48 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
UBCP0CG48 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBCP0CG48 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBCP0CG48 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBCP0CG48 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19■□□□□ 0.63
UBCP0CG48 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19■□□□□ 0.63
UBCP0CG48 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBCP0CG48 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBCP0CG48 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19■□□□□ 0.63
UBCP0CG48 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
UBCP0CG48 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 AC239859.2-201ENST00000444165 318 ntBASIC18.99■□□□□ 0.63
UBCP0CG48 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.99■□□□□ 0.63
UBCP0CG48 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.99■□□□□ 0.63
UBCP0CG48 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBCP0CG48 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.98■□□□□ 0.63
UBCP0CG48 AC010542.4-201ENST00000563151 1910 ntBASIC18.98■□□□□ 0.63
UBCP0CG48 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBCP0CG48 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBCP0CG48 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBCP0CG48 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.98■□□□□ 0.63
UBCP0CG48 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBCP0CG48 TSPY9P-201ENST00000440215 945 ntBASIC18.98■□□□□ 0.63
UBCP0CG48 TSPY11P-201ENST00000442607 1045 ntBASIC18.98■□□□□ 0.63
UBCP0CG48 AL499627.2-201ENST00000606283 725 ntBASIC18.98■□□□□ 0.63
UBCP0CG48 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
UBCP0CG48 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
UBCP0CG48 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.97■□□□□ 0.63
UBCP0CG48 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
UBCP0CG48 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
UBCP0CG48 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.97■□□□□ 0.63
UBCP0CG48 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
UBCP0CG48 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms