Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.85■□□□□ 0.77
SPTA1P02549 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTA1P02549 AC083880.1-201ENST00000608266 535 ntBASIC19.85■□□□□ 0.77
SPTA1P02549 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTA1P02549 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
SPTA1P02549 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
SPTA1P02549 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTA1P02549 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTA1P02549 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTA1P02549 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.85■□□□□ 0.77
SPTA1P02549 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.85■□□□□ 0.77
SPTA1P02549 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SPTA1P02549 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SPTA1P02549 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPTA1P02549 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTA1P02549 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTA1P02549 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPTA1P02549 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTA1P02549 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTA1P02549 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTA1P02549 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPTA1P02549 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.84■□□□□ 0.77
SPTA1P02549 AP001160.3-201ENST00000601484 763 ntBASIC19.84■□□□□ 0.77
SPTA1P02549 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SPTA1P02549 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SPTA1P02549 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.83■□□□□ 0.77
SPTA1P02549 AC008550.1-201ENST00000511500 884 ntBASIC19.83■□□□□ 0.77
SPTA1P02549 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.83■□□□□ 0.77
SPTA1P02549 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SPTA1P02549 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTA1P02549 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.83■□□□□ 0.77
SPTA1P02549 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTA1P02549 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SPTA1P02549 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.83■□□□□ 0.77
SPTA1P02549 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.83■□□□□ 0.76
SPTA1P02549 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.83■□□□□ 0.76
SPTA1P02549 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTA1P02549 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
SPTA1P02549 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.83■□□□□ 0.76
SPTA1P02549 AC092118.2-201ENST00000613495 667 ntBASIC19.83■□□□□ 0.76
SPTA1P02549 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SPTA1P02549 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.82■□□□□ 0.76
SPTA1P02549 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.82■□□□□ 0.76
SPTA1P02549 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SPTA1P02549 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.82■□□□□ 0.76
SPTA1P02549 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTA1P02549 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.82■□□□□ 0.76
SPTA1P02549 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.82■□□□□ 0.76
SPTA1P02549 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPTA1P02549 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
SPTA1P02549 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTA1P02549 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTA1P02549 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SPTA1P02549 MKRN4P-201ENST00000444706 1521 ntBASIC19.81■□□□□ 0.76
SPTA1P02549 RPS2P4-201ENST00000476944 856 ntBASIC19.81■□□□□ 0.76
SPTA1P02549 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.81■□□□□ 0.76
SPTA1P02549 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTA1P02549 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SPTA1P02549 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTA1P02549 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SPTA1P02549 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTA1P02549 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SPTA1P02549 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SPTA1P02549 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.81■□□□□ 0.76
SPTA1P02549 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SPTA1P02549 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SPTA1P02549 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.81■□□□□ 0.76
SPTA1P02549 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.81■□□□□ 0.76
SPTA1P02549 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SPTA1P02549 AC010536.3-201ENST00000620306 533 ntBASIC19.81■□□□□ 0.76
SPTA1P02549 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SPTA1P02549 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.8■□□□□ 0.76
SPTA1P02549 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 DUSP5P2-201ENST00000426873 1033 ntBASIC19.8■□□□□ 0.76
SPTA1P02549 ECEL1P3-201ENST00000427961 737 ntBASIC19.8■□□□□ 0.76
SPTA1P02549 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.8■□□□□ 0.76
SPTA1P02549 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.8■□□□□ 0.76
SPTA1P02549 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.8■□□□□ 0.76
SPTA1P02549 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.8■□□□□ 0.76
SPTA1P02549 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPTA1P02549 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SPTA1P02549 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTA1P02549 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.79■□□□□ 0.76
SPTA1P02549 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SPTA1P02549 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms