Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
COL1A1P02452 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
COL1A1P02452 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.44■■□□□ 1.82
COL1A1P02452 AC137761.2-201ENST00000561729 223 ntBASIC26.44■■□□□ 1.82
COL1A1P02452 AC145350.3-201ENST00000569033 163 ntBASIC26.44■■□□□ 1.82
COL1A1P02452 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC26.44■■□□□ 1.82
COL1A1P02452 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.44■■□□□ 1.82
COL1A1P02452 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.44■■□□□ 1.82
COL1A1P02452 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.44■■□□□ 1.82
COL1A1P02452 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
COL1A1P02452 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
COL1A1P02452 HSCB-202ENST00000398941 955 ntTSL 2 BASIC26.43■■□□□ 1.82
COL1A1P02452 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL1A1P02452 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL1A1P02452 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
COL1A1P02452 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
COL1A1P02452 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A1P02452 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.42■■□□□ 1.82
COL1A1P02452 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A1P02452 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A1P02452 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26.42■■□□□ 1.82
COL1A1P02452 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL1A1P02452 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.42■■□□□ 1.82
COL1A1P02452 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.41■■□□□ 1.82
COL1A1P02452 AP004607.4-201ENST00000530158 1459 ntBASIC26.41■■□□□ 1.82
COL1A1P02452 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL1A1P02452 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL1A1P02452 CDCA4P2-201ENST00000441182 718 ntBASIC26.41■■□□□ 1.82
COL1A1P02452 DBI-210ENST00000542275 757 ntTSL 5 BASIC26.41■■□□□ 1.82
COL1A1P02452 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.41■■□□□ 1.82
COL1A1P02452 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.41■■□□□ 1.82
COL1A1P02452 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.41■■□□□ 1.82
COL1A1P02452 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC26.41■■□□□ 1.82
COL1A1P02452 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL1A1P02452 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.4■■□□□ 1.82
COL1A1P02452 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.4■■□□□ 1.82
COL1A1P02452 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC26.4■■□□□ 1.82
COL1A1P02452 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL1A1P02452 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL1A1P02452 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
COL1A1P02452 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL1A1P02452 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL1A1P02452 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.39■■□□□ 1.82
COL1A1P02452 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL1A1P02452 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.39■■□□□ 1.82
COL1A1P02452 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL1A1P02452 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL1A1P02452 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC26.39■■□□□ 1.82
COL1A1P02452 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL1A1P02452 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL1A1P02452 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
COL1A1P02452 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
COL1A1P02452 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL1A1P02452 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.38■■□□□ 1.81
COL1A1P02452 STX7-201ENST00000367937 1090 ntTSL 5 BASIC26.38■■□□□ 1.81
COL1A1P02452 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.38■■□□□ 1.81
COL1A1P02452 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.38■■□□□ 1.81
COL1A1P02452 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.38■■□□□ 1.81
COL1A1P02452 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.38■■□□□ 1.81
COL1A1P02452 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.38■■□□□ 1.81
COL1A1P02452 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL1A1P02452 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL1A1P02452 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
COL1A1P02452 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A1P02452 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A1P02452 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC26.37■■□□□ 1.81
COL1A1P02452 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.37■■□□□ 1.81
COL1A1P02452 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A1P02452 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.37■■□□□ 1.81
COL1A1P02452 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.37■■□□□ 1.81
COL1A1P02452 PXK-203ENST00000383715 1756 ntTSL 5 BASIC26.37■■□□□ 1.81
COL1A1P02452 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A1P02452 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL1A1P02452 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.36■■□□□ 1.81
COL1A1P02452 WWOX-218ENST00000627394 894 ntTSL 5 BASIC26.36■■□□□ 1.81
COL1A1P02452 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.36■■□□□ 1.81
COL1A1P02452 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL1A1P02452 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.36■■□□□ 1.81
COL1A1P02452 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL1A1P02452 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
COL1A1P02452 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL1A1P02452 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL1A1P02452 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.36■■□□□ 1.81
COL1A1P02452 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.36■■□□□ 1.81
COL1A1P02452 AC026185.1-201ENST00000445748 174 ntBASIC26.36■■□□□ 1.81
COL1A1P02452 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC26.36■■□□□ 1.81
COL1A1P02452 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL1A1P02452 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL1A1P02452 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.36■■□□□ 1.81
COL1A1P02452 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
COL1A1P02452 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL1A1P02452 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms