Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AP003733.4-201ENST00000623785 1697 ntBASIC25.17■■□□□ 1.62
ALDH1A1P00352 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.17■■□□□ 1.62
ALDH1A1P00352 MIPEPP3-201ENST00000412105 444 ntBASIC25.17■■□□□ 1.62
ALDH1A1P00352 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC25.17■■□□□ 1.62
ALDH1A1P00352 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC25.17■■□□□ 1.62
ALDH1A1P00352 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
ALDH1A1P00352 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC25.17■■□□□ 1.62
ALDH1A1P00352 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
ALDH1A1P00352 AC145676.1-201ENST00000514988 2004 ntBASIC25.17■■□□□ 1.62
ALDH1A1P00352 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ALDH1A1P00352 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
ALDH1A1P00352 SLC7A5P1-201ENST00000568957 537 ntBASIC25.16■■□□□ 1.62
ALDH1A1P00352 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
ALDH1A1P00352 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
ALDH1A1P00352 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.16■■□□□ 1.62
ALDH1A1P00352 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ALDH1A1P00352 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ALDH1A1P00352 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ALDH1A1P00352 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 GCSHP5-201ENST00000443090 522 ntBASIC25.15■■□□□ 1.62
ALDH1A1P00352 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 AC098590.1-201ENST00000468126 897 ntBASIC25.15■■□□□ 1.62
ALDH1A1P00352 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 AC013268.1-206ENST00000638368 961 ntBASIC25.15■■□□□ 1.62
ALDH1A1P00352 AC112229.1-201ENST00000639295 961 ntBASIC25.15■■□□□ 1.62
ALDH1A1P00352 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ALDH1A1P00352 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
ALDH1A1P00352 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
ALDH1A1P00352 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
ALDH1A1P00352 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
ALDH1A1P00352 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ALDH1A1P00352 MKRN4P-201ENST00000444706 1521 ntBASIC25.14■■□□□ 1.62
ALDH1A1P00352 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ALDH1A1P00352 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
ALDH1A1P00352 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ALDH1A1P00352 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.14■■□□□ 1.62
ALDH1A1P00352 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC25.14■■□□□ 1.62
ALDH1A1P00352 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.14■■□□□ 1.62
ALDH1A1P00352 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
ALDH1A1P00352 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC25.14■■□□□ 1.62
ALDH1A1P00352 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
ALDH1A1P00352 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
ALDH1A1P00352 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
ALDH1A1P00352 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.13■■□□□ 1.61
ALDH1A1P00352 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ALDH1A1P00352 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
ALDH1A1P00352 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.13■■□□□ 1.61
ALDH1A1P00352 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ALDH1A1P00352 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
ALDH1A1P00352 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC25.13■■□□□ 1.61
ALDH1A1P00352 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.13■■□□□ 1.61
ALDH1A1P00352 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
ALDH1A1P00352 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC25.13■■□□□ 1.61
ALDH1A1P00352 AC135731.1-201ENST00000569415 2548 ntBASIC25.13■■□□□ 1.61
ALDH1A1P00352 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ALDH1A1P00352 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 AC092118.2-201ENST00000613495 667 ntBASIC25.12■■□□□ 1.61
ALDH1A1P00352 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
ALDH1A1P00352 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ALDH1A1P00352 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
ALDH1A1P00352 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
ALDH1A1P00352 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
ALDH1A1P00352 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC25.11■■□□□ 1.61
ALDH1A1P00352 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
ALDH1A1P00352 RARRES2P4-201ENST00000514074 484 ntBASIC25.11■■□□□ 1.61
ALDH1A1P00352 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
ALDH1A1P00352 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.11■■□□□ 1.61
ALDH1A1P00352 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.11■■□□□ 1.61
ALDH1A1P00352 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
ALDH1A1P00352 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.1■■□□□ 1.61
ALDH1A1P00352 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ALDH1A1P00352 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ALDH1A1P00352 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.1■■□□□ 1.61
ALDH1A1P00352 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ALDH1A1P00352 AC010141.2-201ENST00000452426 721 ntBASIC25.1■■□□□ 1.61
ALDH1A1P00352 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC25.1■■□□□ 1.61
ALDH1A1P00352 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ALDH1A1P00352 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
ALDH1A1P00352 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.1■■□□□ 1.61
ALDH1A1P00352 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
ALDH1A1P00352 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms