Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPTM1O96005 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.43■□□□□ 0.86
CLPTM1O96005 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CLPTM1O96005 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPTM1O96005 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPTM1O96005 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPTM1O96005 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CLPTM1O96005 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.42■□□□□ 0.86
CLPTM1O96005 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPTM1O96005 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.42■□□□□ 0.86
CLPTM1O96005 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPTM1O96005 LONRF2P2-201ENST00000439212 571 ntBASIC20.42■□□□□ 0.86
CLPTM1O96005 KRT8P33-201ENST00000508125 1423 ntBASIC20.42■□□□□ 0.86
CLPTM1O96005 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPTM1O96005 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPTM1O96005 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPTM1O96005 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPTM1O96005 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLPTM1O96005 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CLPTM1O96005 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPTM1O96005 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CLPTM1O96005 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.41■□□□□ 0.86
CLPTM1O96005 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.41■□□□□ 0.86
CLPTM1O96005 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPTM1O96005 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPTM1O96005 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLPTM1O96005 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPTM1O96005 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPTM1O96005 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPTM1O96005 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.4■□□□□ 0.86
CLPTM1O96005 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.4■□□□□ 0.86
CLPTM1O96005 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.4■□□□□ 0.86
CLPTM1O96005 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPTM1O96005 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.4■□□□□ 0.86
CLPTM1O96005 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.4■□□□□ 0.86
CLPTM1O96005 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLPTM1O96005 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CLPTM1O96005 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLPTM1O96005 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLPTM1O96005 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLPTM1O96005 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPTM1O96005 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLPTM1O96005 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPTM1O96005 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.39■□□□□ 0.85
CLPTM1O96005 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPTM1O96005 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.39■□□□□ 0.85
CLPTM1O96005 RARRES2P1-201ENST00000474487 481 ntBASIC20.39■□□□□ 0.85
CLPTM1O96005 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLPTM1O96005 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CLPTM1O96005 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.39■□□□□ 0.85
CLPTM1O96005 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLPTM1O96005 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPTM1O96005 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPTM1O96005 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPTM1O96005 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPTM1O96005 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPTM1O96005 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.38■□□□□ 0.85
CLPTM1O96005 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.38■□□□□ 0.85
CLPTM1O96005 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLPTM1O96005 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLPTM1O96005 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
CLPTM1O96005 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPTM1O96005 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLPTM1O96005 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.37■□□□□ 0.85
CLPTM1O96005 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPTM1O96005 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLPTM1O96005 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CLPTM1O96005 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPTM1O96005 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.37■□□□□ 0.85
CLPTM1O96005 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.37■□□□□ 0.85
CLPTM1O96005 AC103834.1-201ENST00000520383 144 ntBASIC20.37■□□□□ 0.85
CLPTM1O96005 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.37■□□□□ 0.85
CLPTM1O96005 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPTM1O96005 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLPTM1O96005 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.37■□□□□ 0.85
CLPTM1O96005 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.36■□□□□ 0.85
CLPTM1O96005 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.36■□□□□ 0.85
CLPTM1O96005 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
CLPTM1O96005 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLPTM1O96005 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CLPTM1O96005 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.35■□□□□ 0.85
CLPTM1O96005 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 AC019171.1-201ENST00000601251 1056 ntBASIC20.35■□□□□ 0.85
CLPTM1O96005 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLPTM1O96005 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms