Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP1O94782 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
USP1O94782 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.97■■□□□ 1.11
USP1O94782 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
USP1O94782 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP1O94782 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP1O94782 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.97■■□□□ 1.11
USP1O94782 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP1O94782 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
USP1O94782 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
USP1O94782 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
USP1O94782 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
USP1O94782 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.97■■□□□ 1.11
USP1O94782 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.96■■□□□ 1.11
USP1O94782 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.96■■□□□ 1.11
USP1O94782 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.96■■□□□ 1.11
USP1O94782 MIR3621-201ENST00000580529 85 ntBASIC21.96■■□□□ 1.11
USP1O94782 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.96■■□□□ 1.11
USP1O94782 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.96■■□□□ 1.11
USP1O94782 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.96■■□□□ 1.11
USP1O94782 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
USP1O94782 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.95■■□□□ 1.11
USP1O94782 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
USP1O94782 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP1O94782 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP1O94782 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP1O94782 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.95■■□□□ 1.1
USP1O94782 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.95■■□□□ 1.1
USP1O94782 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
USP1O94782 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP1O94782 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.95■■□□□ 1.1
USP1O94782 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP1O94782 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
USP1O94782 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
USP1O94782 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP1O94782 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP1O94782 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.94■■□□□ 1.1
USP1O94782 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP1O94782 AC006455.2-201ENST00000429931 906 ntBASIC21.94■■□□□ 1.1
USP1O94782 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.94■■□□□ 1.1
USP1O94782 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
USP1O94782 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP1O94782 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.94■■□□□ 1.1
USP1O94782 AC133637.1-201ENST00000624115 1537 ntBASIC21.94■■□□□ 1.1
USP1O94782 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
USP1O94782 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.94■■□□□ 1.1
USP1O94782 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP1O94782 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
USP1O94782 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.94■■□□□ 1.1
USP1O94782 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP1O94782 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP1O94782 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP1O94782 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP1O94782 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
USP1O94782 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP1O94782 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.93■■□□□ 1.1
USP1O94782 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
USP1O94782 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.93■■□□□ 1.1
USP1O94782 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
USP1O94782 pRNA.6-201ENST00000610482 90 ntBASIC21.93■■□□□ 1.1
USP1O94782 pRNA.5-201ENST00000612139 90 ntBASIC21.93■■□□□ 1.1
USP1O94782 pRNA.11-201ENST00000618423 90 ntBASIC21.93■■□□□ 1.1
USP1O94782 pRNA.13-201ENST00000619112 90 ntBASIC21.93■■□□□ 1.1
USP1O94782 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP1O94782 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
USP1O94782 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.92■■□□□ 1.1
USP1O94782 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
USP1O94782 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.92■■□□□ 1.1
USP1O94782 AC099791.2-201ENST00000605725 427 ntBASIC21.92■■□□□ 1.1
USP1O94782 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
USP1O94782 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.92■■□□□ 1.1
USP1O94782 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.92■■□□□ 1.1
USP1O94782 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
USP1O94782 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
USP1O94782 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
USP1O94782 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.91■■□□□ 1.1
USP1O94782 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.91■■□□□ 1.1
USP1O94782 AL031602.1-201ENST00000633169 911 ntBASIC21.91■■□□□ 1.1
USP1O94782 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
USP1O94782 AL137060.1-201ENST00000618151 2648 ntBASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms