Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PTP4A3O75365 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PTP4A3O75365 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PTP4A3O75365 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTP4A3O75365 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PTP4A3O75365 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTP4A3O75365 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTP4A3O75365 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTP4A3O75365 AL137060.1-201ENST00000618151 2648 ntBASIC19.61■□□□□ 0.73
PTP4A3O75365 SLC25A24-204ENST00000569674 2357 ntBASIC19.61■□□□□ 0.73
PTP4A3O75365 AC026310.3-201ENST00000625186 2373 ntBASIC19.61■□□□□ 0.73
PTP4A3O75365 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTP4A3O75365 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.61■□□□□ 0.73
PTP4A3O75365 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.61■□□□□ 0.73
PTP4A3O75365 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTP4A3O75365 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PTP4A3O75365 AC133637.1-201ENST00000624115 1537 ntBASIC19.61■□□□□ 0.73
PTP4A3O75365 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.61■□□□□ 0.73
PTP4A3O75365 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTP4A3O75365 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PTP4A3O75365 AC006455.2-201ENST00000429931 906 ntBASIC19.6■□□□□ 0.73
PTP4A3O75365 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.6■□□□□ 0.73
PTP4A3O75365 KRT16P3-201ENST00000439127 1283 ntBASIC19.6■□□□□ 0.73
PTP4A3O75365 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.6■□□□□ 0.73
PTP4A3O75365 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.6■□□□□ 0.73
PTP4A3O75365 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.6■□□□□ 0.73
PTP4A3O75365 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTP4A3O75365 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTP4A3O75365 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTP4A3O75365 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PTP4A3O75365 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTP4A3O75365 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTP4A3O75365 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.59■□□□□ 0.73
PTP4A3O75365 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
PTP4A3O75365 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.59■□□□□ 0.73
PTP4A3O75365 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.59■□□□□ 0.73
PTP4A3O75365 pRNA.6-201ENST00000610482 90 ntBASIC19.59■□□□□ 0.73
PTP4A3O75365 pRNA.5-201ENST00000612139 90 ntBASIC19.59■□□□□ 0.73
PTP4A3O75365 pRNA.11-201ENST00000618423 90 ntBASIC19.59■□□□□ 0.73
PTP4A3O75365 pRNA.13-201ENST00000619112 90 ntBASIC19.59■□□□□ 0.73
PTP4A3O75365 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.59■□□□□ 0.73
PTP4A3O75365 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.59■□□□□ 0.73
PTP4A3O75365 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTP4A3O75365 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PTP4A3O75365 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.58■□□□□ 0.73
PTP4A3O75365 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTP4A3O75365 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTP4A3O75365 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.58■□□□□ 0.73
PTP4A3O75365 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.58■□□□□ 0.73
PTP4A3O75365 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.58■□□□□ 0.72
PTP4A3O75365 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.58■□□□□ 0.72
PTP4A3O75365 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.58■□□□□ 0.72
PTP4A3O75365 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.58■□□□□ 0.72
PTP4A3O75365 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A3O75365 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A3O75365 AL035685.1-201ENST00000636663 812 ntBASIC19.58■□□□□ 0.72
PTP4A3O75365 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.58■□□□□ 0.72
PTP4A3O75365 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A3O75365 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PTP4A3O75365 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PTP4A3O75365 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PTP4A3O75365 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.57■□□□□ 0.72
PTP4A3O75365 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.57■□□□□ 0.72
PTP4A3O75365 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PTP4A3O75365 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.57■□□□□ 0.72
PTP4A3O75365 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.57■□□□□ 0.72
PTP4A3O75365 AC079089.2-201ENST00000531211 1277 ntBASIC19.57■□□□□ 0.72
PTP4A3O75365 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 AL356740.2-201ENST00000601559 647 ntBASIC19.57■□□□□ 0.72
PTP4A3O75365 AC099791.2-201ENST00000605725 427 ntBASIC19.57■□□□□ 0.72
PTP4A3O75365 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.57■□□□□ 0.72
PTP4A3O75365 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.57■□□□□ 0.72
PTP4A3O75365 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.57■□□□□ 0.72
PTP4A3O75365 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PTP4A3O75365 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A3O75365 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.56■□□□□ 0.72
PTP4A3O75365 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A3O75365 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A3O75365 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.56■□□□□ 0.72
PTP4A3O75365 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A3O75365 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A3O75365 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.56■□□□□ 0.72
PTP4A3O75365 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A3O75365 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.56■□□□□ 0.72
PTP4A3O75365 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTP4A3O75365 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms