Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH16O75309 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.96■■□□□ 1.11
CDH16O75309 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.96■■□□□ 1.11
CDH16O75309 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CDH16O75309 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
CDH16O75309 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDH16O75309 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH16O75309 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CDH16O75309 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.95■■□□□ 1.1
CDH16O75309 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.95■■□□□ 1.1
CDH16O75309 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.95■■□□□ 1.1
CDH16O75309 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH16O75309 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH16O75309 AC005703.6-201ENST00000623265 1329 ntBASIC21.95■■□□□ 1.1
CDH16O75309 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH16O75309 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CDH16O75309 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CDH16O75309 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.95■■□□□ 1.1
CDH16O75309 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH16O75309 Z98882.1-201ENST00000622160 2253 ntBASIC21.94■■□□□ 1.1
CDH16O75309 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH16O75309 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH16O75309 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH16O75309 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH16O75309 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH16O75309 AC073130.3-201ENST00000624389 2278 ntBASIC21.94■■□□□ 1.1
CDH16O75309 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.93■■□□□ 1.1
CDH16O75309 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH16O75309 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH16O75309 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
CDH16O75309 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CDH16O75309 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.93■■□□□ 1.1
CDH16O75309 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.93■■□□□ 1.1
CDH16O75309 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CDH16O75309 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.93■■□□□ 1.1
CDH16O75309 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH16O75309 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH16O75309 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH16O75309 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDH16O75309 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDH16O75309 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH16O75309 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH16O75309 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH16O75309 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.91■■□□□ 1.1
CDH16O75309 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.91■■□□□ 1.1
CDH16O75309 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDH16O75309 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDH16O75309 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CDH16O75309 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH16O75309 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH16O75309 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.9■■□□□ 1.1
CDH16O75309 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.9■■□□□ 1.1
CDH16O75309 AC004687.1-201ENST00000579003 1625 ntBASIC21.9■■□□□ 1.1
CDH16O75309 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDH16O75309 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH16O75309 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CDH16O75309 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH16O75309 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH16O75309 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CDH16O75309 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.89■■□□□ 1.09
CDH16O75309 AC010980.1-201ENST00000587192 1142 ntBASIC21.89■■□□□ 1.09
CDH16O75309 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH16O75309 MIR6722-201ENST00000617286 78 ntBASIC21.89■■□□□ 1.09
CDH16O75309 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.89■■□□□ 1.09
CDH16O75309 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CDH16O75309 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH16O75309 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CDH16O75309 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH16O75309 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.89■■□□□ 1.09
CDH16O75309 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CDH16O75309 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH16O75309 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDH16O75309 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.89■■□□□ 1.09
CDH16O75309 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CDH16O75309 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH16O75309 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH16O75309 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDH16O75309 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDH16O75309 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.88■■□□□ 1.09
CDH16O75309 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms