Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.51■□□□□ 0.55
SSNA1O43805 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.51■□□□□ 0.55
SSNA1O43805 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.51■□□□□ 0.55
SSNA1O43805 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSNA1O43805 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.51■□□□□ 0.55
SSNA1O43805 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SSNA1O43805 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.5■□□□□ 0.55
SSNA1O43805 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSNA1O43805 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.49■□□□□ 0.55
SSNA1O43805 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SSNA1O43805 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSNA1O43805 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSNA1O43805 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.49■□□□□ 0.55
SSNA1O43805 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSNA1O43805 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
SSNA1O43805 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSNA1O43805 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.49■□□□□ 0.55
SSNA1O43805 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.49■□□□□ 0.55
SSNA1O43805 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSNA1O43805 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SSNA1O43805 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSNA1O43805 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSNA1O43805 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.49■□□□□ 0.55
SSNA1O43805 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSNA1O43805 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSNA1O43805 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SSNA1O43805 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSNA1O43805 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
SSNA1O43805 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSNA1O43805 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.48■□□□□ 0.55
SSNA1O43805 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSNA1O43805 AL353803.4-201ENST00000565882 1934 ntBASIC18.48■□□□□ 0.55
SSNA1O43805 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSNA1O43805 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSNA1O43805 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SSNA1O43805 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSNA1O43805 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SSNA1O43805 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSNA1O43805 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.47■□□□□ 0.55
SSNA1O43805 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SSNA1O43805 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SSNA1O43805 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSNA1O43805 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SSNA1O43805 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.46■□□□□ 0.55
SSNA1O43805 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.46■□□□□ 0.55
SSNA1O43805 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.46■□□□□ 0.55
SSNA1O43805 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 AF106564.1-201ENST00000607058 2553 ntBASIC18.46■□□□□ 0.55
SSNA1O43805 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSNA1O43805 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SSNA1O43805 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SSNA1O43805 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.45■□□□□ 0.54
SSNA1O43805 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SSNA1O43805 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSNA1O43805 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.45■□□□□ 0.54
SSNA1O43805 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSNA1O43805 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.45■□□□□ 0.54
SSNA1O43805 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.45■□□□□ 0.54
SSNA1O43805 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.45■□□□□ 0.54
SSNA1O43805 AL157400.5-201ENST00000507624 621 ntBASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms