Protein–RNA interactions for Protein: O43657

TSPAN6, Tetraspanin-6, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6O43657 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.78■■□□□ 1.08
TSPAN6O43657 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TSPAN6O43657 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.77■■□□□ 1.08
TSPAN6O43657 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN6O43657 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.77■■□□□ 1.08
TSPAN6O43657 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.77■■□□□ 1.08
TSPAN6O43657 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TSPAN6O43657 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.77■■□□□ 1.08
TSPAN6O43657 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.77■■□□□ 1.07
TSPAN6O43657 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TSPAN6O43657 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.76■■□□□ 1.07
TSPAN6O43657 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 KRT18P5-201ENST00000436075 1291 ntBASIC21.76■■□□□ 1.07
TSPAN6O43657 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TSPAN6O43657 LINC01960-201ENST00000563759 1884 ntBASIC21.76■■□□□ 1.07
TSPAN6O43657 TPRG1LP1-201ENST00000598702 760 ntBASIC21.76■■□□□ 1.07
TSPAN6O43657 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TSPAN6O43657 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.76■■□□□ 1.07
TSPAN6O43657 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
TSPAN6O43657 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.76■■□□□ 1.07
TSPAN6O43657 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.75■■□□□ 1.07
TSPAN6O43657 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TSPAN6O43657 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN6O43657 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN6O43657 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.75■■□□□ 1.07
TSPAN6O43657 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TSPAN6O43657 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.75■■□□□ 1.07
TSPAN6O43657 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.75■■□□□ 1.07
TSPAN6O43657 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN6O43657 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TSPAN6O43657 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.74■■□□□ 1.07
TSPAN6O43657 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TSPAN6O43657 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.74■■□□□ 1.07
TSPAN6O43657 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
TSPAN6O43657 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TSPAN6O43657 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.73■■□□□ 1.07
TSPAN6O43657 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TSPAN6O43657 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TSPAN6O43657 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TSPAN6O43657 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TSPAN6O43657 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TSPAN6O43657 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.72■■□□□ 1.07
TSPAN6O43657 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.72■■□□□ 1.07
TSPAN6O43657 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN6O43657 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TSPAN6O43657 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TSPAN6O43657 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
TSPAN6O43657 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN6O43657 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.72■■□□□ 1.07
TSPAN6O43657 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN6O43657 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TSPAN6O43657 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TSPAN6O43657 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TSPAN6O43657 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN6O43657 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.71■■□□□ 1.07
TSPAN6O43657 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN6O43657 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TSPAN6O43657 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.71■■□□□ 1.07
TSPAN6O43657 NTF6G-201ENST00000591094 616 ntBASIC21.71■■□□□ 1.07
TSPAN6O43657 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.71■■□□□ 1.07
TSPAN6O43657 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
TSPAN6O43657 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.71■■□□□ 1.07
TSPAN6O43657 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
TSPAN6O43657 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN6O43657 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN6O43657 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.7■■□□□ 1.06
TSPAN6O43657 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN6O43657 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN6O43657 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN6O43657 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms