Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TO15178 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TO15178 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TO15178 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.05■□□□□ 0.8
TO15178 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TO15178 MIR572-201ENST00000384983 95 ntBASIC20.05■□□□□ 0.8
TO15178 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
TO15178 AC105265.2-201ENST00000467189 838 ntBASIC20.05■□□□□ 0.8
TO15178 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.05■□□□□ 0.8
TO15178 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.05■□□□□ 0.8
TO15178 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TO15178 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TO15178 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.05■□□□□ 0.8
TO15178 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TO15178 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.05■□□□□ 0.8
TO15178 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TO15178 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TO15178 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.04■□□□□ 0.8
TO15178 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.04■□□□□ 0.8
TO15178 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TO15178 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TO15178 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.04■□□□□ 0.8
TO15178 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TO15178 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.04■□□□□ 0.8
TO15178 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.04■□□□□ 0.8
TO15178 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TO15178 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TO15178 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.04■□□□□ 0.8
TO15178 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TO15178 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TO15178 AC233723.2-201ENST00000623798 2106 ntBASIC20.03■□□□□ 0.8
TO15178 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TO15178 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TO15178 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.03■□□□□ 0.8
TO15178 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.03■□□□□ 0.8
TO15178 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.03■□□□□ 0.8
TO15178 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.03■□□□□ 0.8
TO15178 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.03■□□□□ 0.8
TO15178 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TO15178 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
TO15178 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TO15178 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 AC139530.1-201ENST00000575312 1977 ntBASIC20.03■□□□□ 0.8
TO15178 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TO15178 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TO15178 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.02■□□□□ 0.8
TO15178 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TO15178 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TO15178 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TO15178 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.02■□□□□ 0.8
TO15178 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TO15178 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TO15178 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TO15178 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TO15178 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 LINC00526-201ENST00000581067 1875 ntBASIC20.01■□□□□ 0.79
TO15178 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.01■□□□□ 0.79
TO15178 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TO15178 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.01■□□□□ 0.79
TO15178 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
TO15178 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.01■□□□□ 0.79
TO15178 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.01■□□□□ 0.79
TO15178 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.01■□□□□ 0.79
TO15178 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.01■□□□□ 0.79
TO15178 AC133561.1-201ENST00000568600 2415 ntBASIC20.01■□□□□ 0.79
TO15178 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TO15178 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20■□□□□ 0.79
TO15178 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20■□□□□ 0.79
TO15178 AC242852.2-201ENST00000615738 1807 ntBASIC20■□□□□ 0.79
TO15178 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20■□□□□ 0.79
TO15178 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20■□□□□ 0.79
TO15178 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TO15178 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TO15178 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TO15178 AC080038.3-201ENST00000623346 1952 ntBASIC19.99■□□□□ 0.79
TO15178 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms