Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC35.99■■■■□ 3.35
CHD1O14646 RHOD-202ENST00000532559 538 ntTSL 3 BASIC35.99■■■■□ 3.35
CHD1O14646 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
CHD1O14646 ASL-203ENST00000380839 1765 ntTSL 5 BASIC35.99■■■■□ 3.35
CHD1O14646 MFF-207ENST00000409565 1548 ntTSL 2 BASIC35.98■■■■□ 3.35
CHD1O14646 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC35.98■■■■□ 3.35
CHD1O14646 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC35.98■■■■□ 3.35
CHD1O14646 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC35.97■■■■□ 3.35
CHD1O14646 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC35.97■■■■□ 3.35
CHD1O14646 MIR1224-201ENST00000408193 85 ntBASIC35.97■■■■□ 3.35
CHD1O14646 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC35.97■■■■□ 3.35
CHD1O14646 AC004687.1-201ENST00000579003 1625 ntBASIC35.97■■■■□ 3.35
CHD1O14646 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC35.97■■■■□ 3.35
CHD1O14646 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CHD1O14646 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC35.97■■■■□ 3.35
CHD1O14646 AP001160.3-201ENST00000601484 763 ntBASIC35.97■■■■□ 3.35
CHD1O14646 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC35.97■■■■□ 3.35
CHD1O14646 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC35.96■■■■□ 3.35
CHD1O14646 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC35.96■■■■□ 3.35
CHD1O14646 AC010141.2-201ENST00000452426 721 ntBASIC35.96■■■■□ 3.35
CHD1O14646 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC35.95■■■■□ 3.35
CHD1O14646 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
CHD1O14646 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC35.95■■■■□ 3.35
CHD1O14646 AC010331.1-201ENST00000611423 582 ntBASIC35.95■■■■□ 3.35
CHD1O14646 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC35.95■■■■□ 3.34
CHD1O14646 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC35.95■■■■□ 3.34
CHD1O14646 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
CHD1O14646 AC016405.3-201ENST00000607710 860 ntBASIC35.94■■■■□ 3.34
CHD1O14646 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
CHD1O14646 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
CHD1O14646 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC35.94■■■■□ 3.34
CHD1O14646 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
CHD1O14646 AC093787.1-201ENST00000450396 207 ntBASIC35.94■■■■□ 3.34
CHD1O14646 SERP1-208ENST00000491660 830 ntTSL 2 BASIC35.94■■■■□ 3.34
CHD1O14646 AC008550.1-201ENST00000511500 884 ntBASIC35.94■■■■□ 3.34
CHD1O14646 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHD1O14646 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC35.93■■■■□ 3.34
CHD1O14646 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHD1O14646 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC35.93■■■■□ 3.34
CHD1O14646 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC35.93■■■■□ 3.34
CHD1O14646 AC128676.1-201ENST00000454392 318 ntBASIC35.93■■■■□ 3.34
CHD1O14646 AC007322.4-201ENST00000509611 723 ntBASIC35.93■■■■□ 3.34
CHD1O14646 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CHD1O14646 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC35.92■■■■□ 3.34
CHD1O14646 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC35.92■■■■□ 3.34
CHD1O14646 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
CHD1O14646 BET1L-204ENST00000410108 637 ntTSL 3 BASIC35.92■■■■□ 3.34
CHD1O14646 ECEL1P3-201ENST00000427961 737 ntBASIC35.92■■■■□ 3.34
CHD1O14646 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC35.91■■■■□ 3.34
CHD1O14646 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC35.91■■■■□ 3.34
CHD1O14646 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC35.91■■■■□ 3.34
CHD1O14646 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
CHD1O14646 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC35.91■■■■□ 3.34
CHD1O14646 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC35.91■■■■□ 3.34
CHD1O14646 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC35.9■■■■□ 3.34
CHD1O14646 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
CHD1O14646 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC35.9■■■■□ 3.34
CHD1O14646 BET1L-207ENST00000529614 560 ntTSL 5 BASIC35.9■■■■□ 3.34
CHD1O14646 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC35.9■■■■□ 3.34
CHD1O14646 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
CHD1O14646 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CHD1O14646 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CHD1O14646 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC35.89■■■■□ 3.34
CHD1O14646 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CHD1O14646 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC35.89■■■■□ 3.34
CHD1O14646 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC35.89■■■■□ 3.34
CHD1O14646 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC35.89■■■■□ 3.34
CHD1O14646 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CHD1O14646 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
CHD1O14646 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC35.88■■■■□ 3.34
CHD1O14646 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC35.88■■■■□ 3.33
CHD1O14646 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC35.88■■■■□ 3.33
CHD1O14646 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC35.88■■■■□ 3.33
CHD1O14646 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC35.88■■■■□ 3.33
CHD1O14646 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC35.88■■■■□ 3.33
CHD1O14646 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC35.88■■■■□ 3.33
CHD1O14646 KRT18P20-201ENST00000548986 1279 ntBASIC35.88■■■■□ 3.33
CHD1O14646 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC35.88■■■■□ 3.33
CHD1O14646 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CHD1O14646 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC35.87■■■■□ 3.33
CHD1O14646 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC35.87■■■■□ 3.33
CHD1O14646 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
CHD1O14646 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CHD1O14646 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC35.87■■■■□ 3.33
CHD1O14646 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC35.87■■■■□ 3.33
CHD1O14646 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC35.87■■■■□ 3.33
CHD1O14646 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC35.87■■■■□ 3.33
CHD1O14646 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC35.87■■■■□ 3.33
CHD1O14646 INO80E-214ENST00000620599 515 ntTSL 2 BASIC35.87■■■■□ 3.33
CHD1O14646 AC073912.3-201ENST00000624414 853 ntBASIC35.87■■■■□ 3.33
CHD1O14646 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
CHD1O14646 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC35.86■■■■□ 3.33
CHD1O14646 BX276092.2-201ENST00000417668 665 ntBASIC35.86■■■■□ 3.33
CHD1O14646 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
CHD1O14646 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC35.86■■■■□ 3.33
CHD1O14646 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC35.86■■■■□ 3.33
CHD1O14646 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC35.86■■■■□ 3.33
CHD1O14646 MMAB-206ENST00000540016 945 ntTSL 3 BASIC35.86■■■■□ 3.33
CHD1O14646 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
CHD1O14646 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC35.84■■■■□ 3.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms