Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 AC139530.1-201ENST00000575312 1977 ntBASIC20.25■□□□□ 0.83
AP3D1O14617 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3D1O14617 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3D1O14617 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.24■□□□□ 0.83
AP3D1O14617 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.24■□□□□ 0.83
AP3D1O14617 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3D1O14617 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3D1O14617 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.24■□□□□ 0.83
AP3D1O14617 AC080038.3-201ENST00000623346 1952 ntBASIC20.24■□□□□ 0.83
AP3D1O14617 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3D1O14617 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
AP3D1O14617 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP3D1O14617 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
AP3D1O14617 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.23■□□□□ 0.83
AP3D1O14617 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.23■□□□□ 0.83
AP3D1O14617 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.23■□□□□ 0.83
AP3D1O14617 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.23■□□□□ 0.83
AP3D1O14617 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP3D1O14617 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
AP3D1O14617 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 LINC01960-201ENST00000563759 1884 ntBASIC20.22■□□□□ 0.83
AP3D1O14617 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.22■□□□□ 0.83
AP3D1O14617 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.22■□□□□ 0.83
AP3D1O14617 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.22■□□□□ 0.83
AP3D1O14617 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.22■□□□□ 0.83
AP3D1O14617 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AP3D1O14617 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AP3D1O14617 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AP3D1O14617 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP3D1O14617 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
AP3D1O14617 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
AP3D1O14617 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
AP3D1O14617 AC137767.1-201ENST00000602918 1920 ntBASIC20.21■□□□□ 0.83
AP3D1O14617 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
AP3D1O14617 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
AP3D1O14617 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.21■□□□□ 0.83
AP3D1O14617 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
AP3D1O14617 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
AP3D1O14617 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP3D1O14617 AL137060.1-201ENST00000618151 2648 ntBASIC20.21■□□□□ 0.83
AP3D1O14617 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.21■□□□□ 0.83
AP3D1O14617 C11orf96-202ENST00000528572 1834 ntBASIC20.2■□□□□ 0.82
AP3D1O14617 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
AP3D1O14617 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 AC006455.2-201ENST00000429931 906 ntBASIC20.2■□□□□ 0.82
AP3D1O14617 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.2■□□□□ 0.82
AP3D1O14617 AL512631.2-201ENST00000604634 923 ntBASIC20.2■□□□□ 0.82
AP3D1O14617 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP3D1O14617 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.2■□□□□ 0.82
AP3D1O14617 AC004687.1-201ENST00000579003 1625 ntBASIC20.2■□□□□ 0.82
AP3D1O14617 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.2■□□□□ 0.82
AP3D1O14617 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.19■□□□□ 0.82
AP3D1O14617 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
AP3D1O14617 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.19■□□□□ 0.82
AP3D1O14617 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP3D1O14617 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
AP3D1O14617 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.19■□□□□ 0.82
AP3D1O14617 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms