Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.37■□□□□ 0.53
SIRPB1O00241 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.37■□□□□ 0.53
SIRPB1O00241 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.37■□□□□ 0.53
SIRPB1O00241 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.37■□□□□ 0.53
SIRPB1O00241 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPB1O00241 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIRPB1O00241 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
SIRPB1O00241 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SIRPB1O00241 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SIRPB1O00241 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.36■□□□□ 0.53
SIRPB1O00241 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SIRPB1O00241 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.36■□□□□ 0.53
SIRPB1O00241 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.36■□□□□ 0.53
SIRPB1O00241 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIRPB1O00241 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
SIRPB1O00241 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
SIRPB1O00241 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SIRPB1O00241 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SIRPB1O00241 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.35■□□□□ 0.53
SIRPB1O00241 MIR3181-201ENST00000578512 73 ntBASIC18.35■□□□□ 0.53
SIRPB1O00241 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIRPB1O00241 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SIRPB1O00241 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SIRPB1O00241 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SIRPB1O00241 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 AC137767.1-201ENST00000602918 1920 ntBASIC18.34■□□□□ 0.53
SIRPB1O00241 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SIRPB1O00241 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.34■□□□□ 0.53
SIRPB1O00241 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.34■□□□□ 0.53
SIRPB1O00241 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SIRPB1O00241 AC092171.4-201ENST00000609130 632 ntBASIC18.34■□□□□ 0.53
SIRPB1O00241 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.34■□□□□ 0.53
SIRPB1O00241 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.34■□□□□ 0.53
SIRPB1O00241 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIRPB1O00241 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SIRPB1O00241 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIRPB1O00241 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SIRPB1O00241 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.33■□□□□ 0.53
SIRPB1O00241 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIRPB1O00241 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SIRPB1O00241 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
SIRPB1O00241 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SIRPB1O00241 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.33■□□□□ 0.52
SIRPB1O00241 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SIRPB1O00241 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIRPB1O00241 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SIRPB1O00241 MIR4466-201ENST00000606121 54 ntBASIC18.33■□□□□ 0.52
SIRPB1O00241 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.33■□□□□ 0.52
SIRPB1O00241 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SIRPB1O00241 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIRPB1O00241 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SIRPB1O00241 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SIRPB1O00241 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPB1O00241 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPB1O00241 AC131281.2-201ENST00000520478 145 ntBASIC18.32■□□□□ 0.52
SIRPB1O00241 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SIRPB1O00241 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.32■□□□□ 0.52
SIRPB1O00241 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPB1O00241 C11orf96-202ENST00000528572 1834 ntBASIC18.32■□□□□ 0.52
SIRPB1O00241 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPB1O00241 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms