Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24■■□□□ 1.43
TRIM43BA6NCK2 PRORSD1P-201ENST00000295112 541 ntBASIC24■■□□□ 1.43
TRIM43BA6NCK2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24■■□□□ 1.43
TRIM43BA6NCK2 AC133552.2-202ENST00000575694 574 ntBASIC24■■□□□ 1.43
TRIM43BA6NCK2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24■■□□□ 1.43
TRIM43BA6NCK2 KRT18P29-201ENST00000397031 1267 ntBASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 AP003733.4-201ENST00000623785 1697 ntBASIC23.99■■□□□ 1.43
TRIM43BA6NCK2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM43BA6NCK2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.98■■□□□ 1.43
TRIM43BA6NCK2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM43BA6NCK2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM43BA6NCK2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM43BA6NCK2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.98■■□□□ 1.43
TRIM43BA6NCK2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM43BA6NCK2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 AP001160.3-201ENST00000601484 763 ntBASIC23.97■■□□□ 1.43
TRIM43BA6NCK2 AC022211.4-201ENST00000625094 2161 ntBASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM43BA6NCK2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 RNA5SP413-201ENST00000516373 109 ntBASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
TRIM43BA6NCK2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 RPS2P52-201ENST00000469610 820 ntBASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM43BA6NCK2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM43BA6NCK2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 AC009237.3-201ENST00000393279 1427 ntBASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TRIM43BA6NCK2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 AC079630.1-202ENST00000618127 1840 ntBASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
TRIM43BA6NCK2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRIM43BA6NCK2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms