Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 PARP1-202ENST00000366792 553 ntTSL 3 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SBNO1A3KN83 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC29.87■■■□□ 2.37
SBNO1A3KN83 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
SBNO1A3KN83 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SBNO1A3KN83 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SBNO1A3KN83 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SBNO1A3KN83 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.86■■■□□ 2.37
SBNO1A3KN83 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
SBNO1A3KN83 AC073210.2-201ENST00000430369 194 ntBASIC29.86■■■□□ 2.37
SBNO1A3KN83 RGMA-211ENST00000557420 989 ntTSL 3 BASIC29.86■■■□□ 2.37
SBNO1A3KN83 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
SBNO1A3KN83 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC29.86■■■□□ 2.37
SBNO1A3KN83 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SBNO1A3KN83 LINC01124-201ENST00000409786 2117 ntBASIC29.85■■■□□ 2.37
SBNO1A3KN83 AC079630.1-202ENST00000618127 1840 ntBASIC29.85■■■□□ 2.37
SBNO1A3KN83 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SBNO1A3KN83 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SBNO1A3KN83 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
SBNO1A3KN83 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
SBNO1A3KN83 MYCNOS-205ENST00000641950 531 ntBASIC29.85■■■□□ 2.37
SBNO1A3KN83 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SBNO1A3KN83 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SBNO1A3KN83 SLC29A4P1-201ENST00000398760 971 ntBASIC29.84■■■□□ 2.37
SBNO1A3KN83 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
SBNO1A3KN83 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC29.84■■■□□ 2.37
SBNO1A3KN83 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC29.84■■■□□ 2.37
SBNO1A3KN83 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC29.84■■■□□ 2.37
SBNO1A3KN83 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.84■■■□□ 2.37
SBNO1A3KN83 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC29.84■■■□□ 2.37
SBNO1A3KN83 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC29.84■■■□□ 2.37
SBNO1A3KN83 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC29.83■■■□□ 2.37
SBNO1A3KN83 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SBNO1A3KN83 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SBNO1A3KN83 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC29.83■■■□□ 2.37
SBNO1A3KN83 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SBNO1A3KN83 AL139125.2-201ENST00000623134 1869 ntBASIC29.83■■■□□ 2.37
SBNO1A3KN83 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC29.83■■■□□ 2.37
SBNO1A3KN83 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
SBNO1A3KN83 PFKL-212ENST00000628044 129 ntTSL 3 BASIC29.83■■■□□ 2.37
SBNO1A3KN83 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SBNO1A3KN83 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
SBNO1A3KN83 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC29.83■■■□□ 2.37
SBNO1A3KN83 AC004812.2-201ENST00000611079 2094 ntBASIC29.83■■■□□ 2.37
SBNO1A3KN83 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SBNO1A3KN83 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SBNO1A3KN83 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC29.82■■■□□ 2.36
SBNO1A3KN83 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC29.82■■■□□ 2.36
SBNO1A3KN83 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
SBNO1A3KN83 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC29.82■■■□□ 2.36
SBNO1A3KN83 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
SBNO1A3KN83 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC29.82■■■□□ 2.36
SBNO1A3KN83 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC29.81■■■□□ 2.36
SBNO1A3KN83 CNN2P6-201ENST00000439038 900 ntBASIC29.81■■■□□ 2.36
SBNO1A3KN83 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
SBNO1A3KN83 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
SBNO1A3KN83 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC29.81■■■□□ 2.36
SBNO1A3KN83 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SBNO1A3KN83 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SBNO1A3KN83 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SBNO1A3KN83 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC29.8■■■□□ 2.36
SBNO1A3KN83 USP45-205ENST00000472914 1617 ntTSL 5 BASIC29.8■■■□□ 2.36
SBNO1A3KN83 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC29.8■■■□□ 2.36
SBNO1A3KN83 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC29.8■■■□□ 2.36
SBNO1A3KN83 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 AC009237.3-201ENST00000393279 1427 ntBASIC29.79■■■□□ 2.36
SBNO1A3KN83 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 BRI3-207ENST00000539286 699 ntTSL 2 BASIC29.79■■■□□ 2.36
SBNO1A3KN83 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.79■■■□□ 2.36
SBNO1A3KN83 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SBNO1A3KN83 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
SBNO1A3KN83 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
SBNO1A3KN83 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SBNO1A3KN83 AC098934.4-201ENST00000564127 592 ntBASIC29.78■■■□□ 2.36
SBNO1A3KN83 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SBNO1A3KN83 AC133041.1-202ENST00000642053 222 ntBASIC29.78■■■□□ 2.36
SBNO1A3KN83 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SBNO1A3KN83 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SBNO1A3KN83 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SBNO1A3KN83 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC29.78■■■□□ 2.36
SBNO1A3KN83 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC29.77■■■□□ 2.36
SBNO1A3KN83 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC29.77■■■□□ 2.36
SBNO1A3KN83 AC133552.2-202ENST00000575694 574 ntBASIC29.77■■■□□ 2.36
SBNO1A3KN83 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
SBNO1A3KN83 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.77■■■□□ 2.36
SBNO1A3KN83 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
SBNO1A3KN83 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SBNO1A3KN83 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms