Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19■□□□□ 0.63
SHISA3A0PJX4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19■□□□□ 0.63
SHISA3A0PJX4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19■□□□□ 0.63
SHISA3A0PJX4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19■□□□□ 0.63
SHISA3A0PJX4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19■□□□□ 0.63
SHISA3A0PJX4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SHISA3A0PJX4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SHISA3A0PJX4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19■□□□□ 0.63
SHISA3A0PJX4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SHISA3A0PJX4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 KRT18P60-201ENST00000312876 1297 ntBASIC18.98■□□□□ 0.63
SHISA3A0PJX4 KRT18P24-201ENST00000344739 1156 ntBASIC18.98■□□□□ 0.63
SHISA3A0PJX4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SHISA3A0PJX4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.97■□□□□ 0.63
SHISA3A0PJX4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 FP325331.1-202ENST00000623531 1380 ntBASIC18.96■□□□□ 0.63
SHISA3A0PJX4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 SNX5-217ENST00000606557 1087 ntBASIC18.96■□□□□ 0.63
SHISA3A0PJX4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SHISA3A0PJX4 LINC01006-201ENST00000333319 2292 ntBASIC18.95■□□□□ 0.62
SHISA3A0PJX4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHISA3A0PJX4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 AC009086.3-201ENST00000623486 1008 ntBASIC18.94■□□□□ 0.62
SHISA3A0PJX4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 AC026471.6-201ENST00000622954 1905 ntBASIC18.94■□□□□ 0.62
SHISA3A0PJX4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHISA3A0PJX4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms