Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TRAV21A0A0B4J279 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 MTDHP2-201ENST00000601468 714 ntBASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 AC092028.1-203ENST00000608262 953 ntBASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAV21A0A0B4J279 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRAV21A0A0B4J279 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 AC004687.1-201ENST00000579003 1625 ntBASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAV21A0A0B4J279 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 AC009102.2-201ENST00000606772 1639 ntBASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV21A0A0B4J279 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 Z92544.1-202ENST00000571933 1220 ntBASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 CA15P2-201ENST00000611168 834 ntBASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAV21A0A0B4J279 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV21A0A0B4J279 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV21A0A0B4J279 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms