Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-4A0A0B4J246 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV8-4A0A0B4J246 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 RARRES2P1-201ENST00000474487 481 ntBASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 MTDHP2-201ENST00000601468 714 ntBASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV8-4A0A0B4J246 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 MIR4787-201ENST00000607364 84 ntBASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TRAV8-4A0A0B4J246 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV8-4A0A0B4J246 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 AC079630.1-202ENST00000618127 1840 ntBASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms