Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC187A0A096LP49 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC187A0A096LP49 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC187A0A096LP49 AC104187.1-201ENST00000607510 612 ntBASIC20.73■□□□□ 0.91
CCDC187A0A096LP49 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC187A0A096LP49 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC187A0A096LP49 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC187A0A096LP49 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC187A0A096LP49 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC187A0A096LP49 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC187A0A096LP49 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC187A0A096LP49 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC187A0A096LP49 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC187A0A096LP49 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 AL121832.2-201ENST00000610979 668 ntBASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 AC231657.2-201ENST00000624556 255 ntBASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC187A0A096LP49 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 LINC01124-201ENST00000409786 2117 ntBASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC187A0A096LP49 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC187A0A096LP49 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 CD99P1-205ENST00000527459 561 ntBASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 AC142086.2-201ENST00000569753 217 ntBASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 TMEM191A-211ENST00000637163 1067 ntBASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCDC187A0A096LP49 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 AL139125.2-201ENST00000623134 1869 ntBASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 AC007322.1-201ENST00000426983 750 ntBASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 AC083906.2-201ENST00000511578 360 ntBASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC187A0A096LP49 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 AL050303.2-201ENST00000619798 666 ntBASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 DUSP8P3-201ENST00000399571 1760 ntBASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 AC004812.2-201ENST00000611079 2094 ntBASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC187A0A096LP49 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC187A0A096LP49 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms