Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV18A0A075B6X5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 KRT18P24-201ENST00000344739 1156 ntBASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRAV18A0A075B6X5 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 KRT18P60-201ENST00000312876 1297 ntBASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV18A0A075B6X5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 DUX4L18-201ENST00000553347 1267 ntBASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV18A0A075B6X5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.64■□□□□ 0.58
TRAV18A0A075B6X5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV18A0A075B6X5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV18A0A075B6X5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV18A0A075B6X5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV18A0A075B6X5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.64■□□□□ 0.58
TRAV18A0A075B6X5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV18A0A075B6X5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 FP325331.1-202ENST00000623531 1380 ntBASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV18A0A075B6X5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV18A0A075B6X5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV18A0A075B6X5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms