Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 KCNE1-205ENST00000416357 796 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 AC009237.11-201ENST00000425635 265 ntBASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 PTPA-219ENST00000435305 530 ntTSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 RRM2P2-201ENST00000436212 652 ntBASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 AL929472.4-201ENST00000447422 691 ntBASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 AC018892.1-201ENST00000451098 265 ntBASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 AC015911.7-201ENST00000587542 958 ntBASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 MAPK10-262ENST00000641051 5738 ntBASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 ARSF-201ENST00000359361 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 LINC01429-201ENST00000438154 2326 ntTSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 TP53TG3F-201ENST00000617705 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 CELF2-210ENST00000631816 1803 ntTSL 2 BASIC11.63□□□□□ -0.55
PRICKLE4Q2TBC4 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AMD1P4-201ENST00000299540 1345 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 SPRED2-201ENST00000356388 4097 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 NDUFB8-203ENST00000370322 713 ntTSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 CDCA4P3-201ENST00000442572 689 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC099343.1-201ENST00000513481 609 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 BCRP5-201ENST00000514371 253 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AL118557.1-201ENST00000554408 440 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC025219.1-201ENST00000559299 526 ntTSL 4 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 RN7SL602P-201ENST00000578326 324 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC136475.9-201ENST00000605240 497 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC090510.3-201ENST00000615831 821 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 NR1I2-206ENST00000638727 1194 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 AC011487.2-202ENST00000599707 1356 ntBASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 GRM3-203ENST00000439827 1811 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 USP8-219ENST00000625664 1568 ntTSL 5 BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 HHIPL2-201ENST00000343410 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
PRICKLE4Q2TBC4 PPP1R18-202ENST00000399199 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms