Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.92□□□□□ -0.5
SCN2BO60939 PATJ-215ENST00000635137 2298 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 RAET1K-202ENST00000533735 1883 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
SCN2BO60939 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 KRT18P44-201ENST00000416086 1285 ntBASIC11.92□□□□□ -0.5
SCN2BO60939 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC11.92□□□□□ -0.5
SCN2BO60939 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC11.92□□□□□ -0.5
SCN2BO60939 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC11.92□□□□□ -0.5
SCN2BO60939 KRTAP9-10P-201ENST00000435672 207 ntBASIC11.92□□□□□ -0.5
SCN2BO60939 NRADDP-201ENST00000437305 691 ntBASIC11.92□□□□□ -0.5
SCN2BO60939 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 AREG-202ENST00000502307 956 ntTSL 5 BASIC11.92□□□□□ -0.5
SCN2BO60939 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC11.92□□□□□ -0.5
SCN2BO60939 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC11.92□□□□□ -0.5
SCN2BO60939 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC11.92□□□□□ -0.5
SCN2BO60939 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC11.92□□□□□ -0.5
SCN2BO60939 AC239600.1-201ENST00000603201 462 ntBASIC11.92□□□□□ -0.5
SCN2BO60939 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC11.92□□□□□ -0.5
SCN2BO60939 AC025278.3-201ENST00000636139 796 ntBASIC11.92□□□□□ -0.5
SCN2BO60939 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 DOCK10-201ENST00000258390 7260 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
SCN2BO60939 RGL1-201ENST00000304685 5100 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 AL590483.3-201ENST00000623669 3580 ntBASIC11.92□□□□□ -0.5
SCN2BO60939 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 IL16-203ENST00000394652 2397 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SCN2BO60939 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 AC092159.2-201ENST00000445418 1943 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 AL596223.1-201ENST00000450995 1933 ntTSL 2 BASIC11.92□□□□□ -0.5
SCN2BO60939 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC11.91□□□□□ -0.5
SCN2BO60939 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SCN2BO60939 AC026271.1-201ENST00000447794 1348 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 AL357140.3-201ENST00000639753 1983 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 PCDHA9-201ENST00000378122 6900 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 TMEM147-AS1-205ENST00000590717 3300 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
SCN2BO60939 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 HLA-W-207ENST00000439514 771 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 AC104784.1-201ENST00000473096 294 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 AC139795.1-201ENST00000499314 838 ntTSL 5 BASIC11.91□□□□□ -0.5
SCN2BO60939 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC11.91□□□□□ -0.5
SCN2BO60939 DERL1-204ENST00000519018 575 ntTSL 4 BASIC11.91□□□□□ -0.5
SCN2BO60939 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC11.91□□□□□ -0.5
SCN2BO60939 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC11.91□□□□□ -0.5
SCN2BO60939 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC11.91□□□□□ -0.5
SCN2BO60939 AC023968.2-201ENST00000560593 1049 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 RN7SL190P-201ENST00000582519 257 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 AC002472.4-201ENST00000641915 272 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC11.91□□□□□ -0.5
SCN2BO60939 ZNF530-201ENST00000332854 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 AL021408.2-201ENST00000624196 1544 ntBASIC11.91□□□□□ -0.5
SCN2BO60939 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SCN2BO60939 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SCN2BO60939 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.9□□□□□ -0.5
SCN2BO60939 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms