Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 AC253536.1-201ENST00000437021 315 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 AL096677.1-201ENST00000442884 814 ntTSL 3 BASIC13.2□□□□□ -0.3
MTHFRP42898 GPAT2P2-201ENST00000445404 863 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 AL132656.1-201ENST00000452173 490 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 RN7SL313P-201ENST00000497618 288 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 KRT19P3-201ENST00000507547 828 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 AC022424.2-201ENST00000514848 454 ntTSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 BIN3-210ENST00000522268 321 ntTSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 EEF1DP8-201ENST00000534760 536 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 AC069234.1-201ENST00000542620 583 ntTSL 3 BASIC13.2□□□□□ -0.3
MTHFRP42898 KRT127P-201ENST00000547183 433 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 CD63-212ENST00000552067 621 ntTSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 MIR1587-201ENST00000583319 53 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 AC092329.1-201ENST00000594653 574 ntTSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 AC105105.4-201ENST00000610389 713 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 AC002511.3-201ENST00000638098 420 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 AC022400.8-201ENST00000623453 3599 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MTHFRP42898 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 IMPDH1P8-201ENST00000413639 1525 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 PPATP1-201ENST00000496669 1547 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC13.19□□□□□ -0.3
MTHFRP42898 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 REG3A-201ENST00000305165 718 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MTHFRP42898 MIR4435-2HG-201ENST00000308604 552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 SNORA52-201ENST00000362915 134 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 CYTOR-202ENST00000409054 1096 ntTSL 2 BASIC13.19□□□□□ -0.3
MTHFRP42898 AC011997.1-201ENST00000409845 1032 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 AC074085.2-201ENST00000416734 428 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 BX571846.1-201ENST00000447347 553 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 AC073465.1-201ENST00000456671 464 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 OR7E26P-201ENST00000502808 1006 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
MTHFRP42898 AC003072.1-201ENST00000510957 612 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 RPS20-208ENST00000521262 650 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
MTHFRP42898 MIR4296-201ENST00000581038 88 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 RN7SL733P-201ENST00000582253 329 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 AKR1B1P7-201ENST00000587229 952 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 CTBP2P7-201ENST00000593270 1244 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 SRGAP3-AS2-203ENST00000600323 1294 ntTSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 AC078880.3-201ENST00000603439 1121 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 TTC28-AS1_1.1-201ENST00000614690 162 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 RN7SL248P-201ENST00000615117 329 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 RN7SL453P-201ENST00000620275 329 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 ARL14EPL-203ENST00000634632 642 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 MECP2-226ENST00000640414 897 ntTSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 FURIN-208ENST00000640725 224 ntTSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 HDGF-203ENST00000368209 2171 ntTSL 2 BASIC13.19□□□□□ -0.3
MTHFRP42898 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC13.19□□□□□ -0.3
MTHFRP42898 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC13.19□□□□□ -0.3
MTHFRP42898 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 AL805961.2-201ENST00000642139 4817 ntBASIC13.19□□□□□ -0.3
MTHFRP42898 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MTHFRP42898 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms