Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZNF132-201ENST00000254166 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 EHD1-213ENST00000621096 3336 ntTSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
SCN2BO60939 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 SNORA30.1-201ENST00000363193 129 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SCN2BO60939 OR10N1P-201ENST00000392758 869 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 MARCKSL1P2-201ENST00000401037 976 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 RPSAP6-201ENST00000417882 882 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 AL080243.1-201ENST00000423293 1060 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 HLA-DPA2-205ENST00000433582 733 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC12.01□□□□□ -0.49
SCN2BO60939 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC12.01□□□□□ -0.49
SCN2BO60939 RN7SL147P-201ENST00000487345 298 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.01□□□□□ -0.49
SCN2BO60939 AC023162.1-201ENST00000505608 474 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 AC093367.1-201ENST00000517332 420 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.01□□□□□ -0.49
SCN2BO60939 RN7SL555P-201ENST00000584742 339 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 PRKN-210ENST00000612540 603 ntTSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 AL132780.4-201ENST00000624870 1135 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 AC073335.2-201ENST00000610177 3441 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 TAS1R1-202ENST00000351136 1871 ntTSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 AC011239.2-201ENST00000624820 1489 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 AC037459.3-201ENST00000521025 2750 ntBASIC12.01□□□□□ -0.49
SCN2BO60939 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC12.01□□□□□ -0.49
SCN2BO60939 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SCN2BO60939 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC12.01□□□□□ -0.49
SCN2BO60939 FAM81A-201ENST00000288228 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SCN2BO60939 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC12□□□□□ -0.49
SCN2BO60939 PPP1R26P5-201ENST00000416640 3664 ntBASIC12□□□□□ -0.49
SCN2BO60939 ORC6-204ENST00000566860 1699 ntTSL 2 BASIC12□□□□□ -0.49
SCN2BO60939 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC12□□□□□ -0.49
SCN2BO60939 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC12□□□□□ -0.49
SCN2BO60939 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SCN2BO60939 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC12□□□□□ -0.49
SCN2BO60939 DIO1-202ENST00000361921 1861 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 AP001198.1-201ENST00000586278 1852 ntTSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 HSPA8P7-201ENST00000443628 1948 ntBASIC12□□□□□ -0.49
SCN2BO60939 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SCN2BO60939 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SCN2BO60939 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 SLC12A8-202ENST00000430155 2831 ntTSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 SNORA52-201ENST00000362915 134 ntBASIC12□□□□□ -0.49
SCN2BO60939 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SCN2BO60939 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12□□□□□ -0.49
SCN2BO60939 AC064836.1-201ENST00000405197 704 ntBASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms