Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HLA-DRB4X5D2U9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 DUX4L19-201ENST00000557448 1267 ntBASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 AL121603.2-201ENST00000557373 2117 ntBASIC16.36■□□□□ 0.21
HLA-DRB4X5D2U9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 AL136116.3-201ENST00000402907 1138 ntBASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 ESRRAP2-201ENST00000418437 1549 ntBASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 AC133637.1-201ENST00000624115 1537 ntBASIC16.35■□□□□ 0.21
HLA-DRB4X5D2U9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 SLC25A24-204ENST00000569674 2357 ntBASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 SYT6-210ENST00000641643 1587 ntBASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DRB4X5D2U9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB4X5D2U9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB4X5D2U9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB4X5D2U9 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB4X5D2U9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB4X5D2U9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
HLA-DRB4X5D2U9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DRB4X5D2U9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 MIR3181-201ENST00000578512 73 ntBASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 AL138724.1-201ENST00000606771 1088 ntBASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DRB4X5D2U9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DRB4X5D2U9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms