Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HS3ST3A1Q9Y663 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HS3ST3A1Q9Y663 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HS3ST3A1Q9Y663 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 KRT18P61-201ENST00000585825 1298 ntBASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
HS3ST3A1Q9Y663 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HS3ST3A1Q9Y663 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.52■■□□□ 1.03
HS3ST3A1Q9Y663 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 AC009237.3-201ENST00000393279 1427 ntBASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HS3ST3A1Q9Y663 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HS3ST3A1Q9Y663 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HS3ST3A1Q9Y663 AC004854.2-201ENST00000608450 1441 ntBASIC21.5■■□□□ 1.03
HS3ST3A1Q9Y663 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.5■■□□□ 1.03
HS3ST3A1Q9Y663 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HS3ST3A1Q9Y663 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HS3ST3A1Q9Y663 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
HS3ST3A1Q9Y663 KRT19P1-201ENST00000405746 1186 ntBASIC21.49■■□□□ 1.03
HS3ST3A1Q9Y663 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.49■■□□□ 1.03
HS3ST3A1Q9Y663 AC006015.1-201ENST00000429970 570 ntBASIC21.49■■□□□ 1.03
HS3ST3A1Q9Y663 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.49■■□□□ 1.03
HS3ST3A1Q9Y663 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.49■■□□□ 1.03
HS3ST3A1Q9Y663 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HS3ST3A1Q9Y663 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.49■■□□□ 1.03
HS3ST3A1Q9Y663 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 AC079089.2-201ENST00000531211 1277 ntBASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 AC137761.2-201ENST00000561729 223 ntBASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 AC145350.3-201ENST00000569033 163 ntBASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.48■■□□□ 1.03
HS3ST3A1Q9Y663 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HS3ST3A1Q9Y663 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HS3ST3A1Q9Y663 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms