Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPS3Q9UNS2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.4■□□□□ 0.7
COPS3Q9UNS2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COPS3Q9UNS2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.39■□□□□ 0.7
COPS3Q9UNS2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.39■□□□□ 0.7
COPS3Q9UNS2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
COPS3Q9UNS2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPS3Q9UNS2 FAM99A-202ENST00000538190 1989 ntBASIC19.39■□□□□ 0.7
COPS3Q9UNS2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.39■□□□□ 0.69
COPS3Q9UNS2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 AC092028.1-203ENST00000608262 953 ntBASIC19.38■□□□□ 0.69
COPS3Q9UNS2 AC026310.3-201ENST00000625186 2373 ntBASIC19.38■□□□□ 0.69
COPS3Q9UNS2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.38■□□□□ 0.69
COPS3Q9UNS2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
COPS3Q9UNS2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COPS3Q9UNS2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
COPS3Q9UNS2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
COPS3Q9UNS2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms