Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 ABCB10P4-201ENST00000566803 2184 ntBASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 AC104771.1-201ENST00000603335 964 ntBASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NOTCH3Q9UM47 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 AP004607.4-201ENST00000530158 1459 ntBASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NOTCH3Q9UM47 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 NCF1B-203ENST00000435988 1254 ntBASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NOTCH3Q9UM47 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NOTCH3Q9UM47 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 MIR663A-201ENST00000385250 93 ntBASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 KRT18P11-201ENST00000435214 1283 ntBASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 MFSD11-216ENST00000590393 1141 ntBASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 LINC02228-203ENST00000641970 1355 ntBASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NOTCH3Q9UM47 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
NOTCH3Q9UM47 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 GPX1P1-201ENST00000388829 606 ntBASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms