Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 AL117332.1-201ENST00000622628 974 ntBASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KCNIP1Q9NZI2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.27■□□□□ 0.52
KCNIP1Q9NZI2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.27■□□□□ 0.51
KCNIP1Q9NZI2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.27■□□□□ 0.51
KCNIP1Q9NZI2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
KCNIP1Q9NZI2 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
KCNIP1Q9NZI2 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KCNIP1Q9NZI2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
KCNIP1Q9NZI2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.27■□□□□ 0.51
KCNIP1Q9NZI2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 KRT16P3-201ENST00000439127 1283 ntBASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
KCNIP1Q9NZI2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 UNC93B8-201ENST00000511903 705 ntBASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 AC241377.3-202ENST00000626088 1088 ntBASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 AC241585.3-202ENST00000628937 1088 ntBASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 AC245100.8-202ENST00000629247 1058 ntBASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KCNIP1Q9NZI2 AC139530.1-201ENST00000575312 1977 ntBASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 AC080038.3-201ENST00000623346 1952 ntBASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KCNIP1Q9NZI2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 C11orf96-202ENST00000528572 1834 ntBASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KCNIP1Q9NZI2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KCNIP1Q9NZI2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KCNIP1Q9NZI2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNIP1Q9NZI2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
KCNIP1Q9NZI2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
KCNIP1Q9NZI2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
KCNIP1Q9NZI2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms