Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RBFOX1Q9NWB1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RBFOX1Q9NWB1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RBFOX1Q9NWB1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RBFOX1Q9NWB1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RBFOX1Q9NWB1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
RBFOX1Q9NWB1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RBFOX1Q9NWB1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 SNX5-217ENST00000606557 1087 ntBASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 AC137630.3-201ENST00000607245 391 ntBASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.14■□□□□ 0.65
RBFOX1Q9NWB1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RBFOX1Q9NWB1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RBFOX1Q9NWB1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RBFOX1Q9NWB1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.12■□□□□ 0.65
RBFOX1Q9NWB1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
RBFOX1Q9NWB1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms