Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 FAM99A-202ENST00000538190 1989 ntBASIC19.7■□□□□ 0.74
HINT3Q9NQE9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HINT3Q9NQE9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HINT3Q9NQE9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HINT3Q9NQE9 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.67■□□□□ 0.74
HINT3Q9NQE9 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HINT3Q9NQE9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HINT3Q9NQE9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.65■□□□□ 0.74
HINT3Q9NQE9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HINT3Q9NQE9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HINT3Q9NQE9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.64■□□□□ 0.74
HINT3Q9NQE9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HINT3Q9NQE9 AL024507.2-201ENST00000606070 2574 ntBASIC19.64■□□□□ 0.73
HINT3Q9NQE9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 MIR6724-1-201ENST00000616420 92 ntBASIC19.64■□□□□ 0.73
HINT3Q9NQE9 MIR6724-2-201ENST00000616483 92 ntBASIC19.64■□□□□ 0.73
HINT3Q9NQE9 MIR6724-4-201ENST00000617390 92 ntBASIC19.64■□□□□ 0.73
HINT3Q9NQE9 MIR6724-3-201ENST00000622482 92 ntBASIC19.64■□□□□ 0.73
HINT3Q9NQE9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 AC004687.1-201ENST00000579003 1625 ntBASIC19.64■□□□□ 0.73
HINT3Q9NQE9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HINT3Q9NQE9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.63■□□□□ 0.73
HINT3Q9NQE9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms