Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 IGHV3-19-201ENST00000521488 291 ntBASIC20.59■□□□□ 0.89
LYRM4Q9HD34 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
LYRM4Q9HD34 AC137767.1-201ENST00000602918 1920 ntBASIC20.59■□□□□ 0.89
LYRM4Q9HD34 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.58■□□□□ 0.89
LYRM4Q9HD34 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYRM4Q9HD34 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYRM4Q9HD34 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYRM4Q9HD34 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYRM4Q9HD34 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LYRM4Q9HD34 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.58■□□□□ 0.89
LYRM4Q9HD34 AC079089.2-201ENST00000531211 1277 ntBASIC20.58■□□□□ 0.89
LYRM4Q9HD34 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LYRM4Q9HD34 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
LYRM4Q9HD34 OXCT2P1-201ENST00000447263 1535 ntBASIC20.58■□□□□ 0.88
LYRM4Q9HD34 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
LYRM4Q9HD34 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LYRM4Q9HD34 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LYRM4Q9HD34 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.57■□□□□ 0.88
LYRM4Q9HD34 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.57■□□□□ 0.88
LYRM4Q9HD34 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.57■□□□□ 0.88
LYRM4Q9HD34 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LYRM4Q9HD34 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LYRM4Q9HD34 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LYRM4Q9HD34 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 GUSBP5-202ENST00000510805 1989 ntBASIC20.54■□□□□ 0.88
LYRM4Q9HD34 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LYRM4Q9HD34 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 AC242852.2-201ENST00000615738 1807 ntBASIC20.53■□□□□ 0.88
LYRM4Q9HD34 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 AC139530.1-201ENST00000575312 1977 ntBASIC20.53■□□□□ 0.88
LYRM4Q9HD34 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.53■□□□□ 0.88
LYRM4Q9HD34 TSPY26P-201ENST00000476365 1326 ntBASIC20.53■□□□□ 0.88
LYRM4Q9HD34 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LYRM4Q9HD34 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms