Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TUBB1Q9H4B7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TUBB1Q9H4B7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TUBB1Q9H4B7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 UNC93B8-201ENST00000511903 705 ntBASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TUBB1Q9H4B7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TUBB1Q9H4B7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TUBB1Q9H4B7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TUBB1Q9H4B7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 MIR6724-1-201ENST00000616420 92 ntBASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 MIR6724-2-201ENST00000616483 92 ntBASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 MIR6724-4-201ENST00000617390 92 ntBASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 MIR6724-3-201ENST00000622482 92 ntBASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TUBB1Q9H4B7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TUBB1Q9H4B7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TUBB1Q9H4B7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TUBB1Q9H4B7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TUBB1Q9H4B7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms