Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.28■■□□□ 1.32
SNX25Q9H3E2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNX25Q9H3E2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SNX25Q9H3E2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.27■■□□□ 1.32
SNX25Q9H3E2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.27■■□□□ 1.32
SNX25Q9H3E2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
SNX25Q9H3E2 AC105233.4-201ENST00000642045 216 ntBASIC23.27■■□□□ 1.32
SNX25Q9H3E2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.27■■□□□ 1.32
SNX25Q9H3E2 OXCT2P1-201ENST00000447263 1535 ntBASIC23.27■■□□□ 1.32
SNX25Q9H3E2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.27■■□□□ 1.32
SNX25Q9H3E2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 AL358852.1-201ENST00000623174 1268 ntBASIC23.26■■□□□ 1.31
SNX25Q9H3E2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SNX25Q9H3E2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 C9orf163-202ENST00000624034 2573 ntBASIC23.25■■□□□ 1.31
SNX25Q9H3E2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SNX25Q9H3E2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 AC012414.1-201ENST00000556676 535 ntBASIC23.24■■□□□ 1.31
SNX25Q9H3E2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 AL354811.1-201ENST00000610286 706 ntBASIC23.24■■□□□ 1.31
SNX25Q9H3E2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.24■■□□□ 1.31
SNX25Q9H3E2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 MIR6084-201ENST00000622012 110 ntBASIC23.23■■□□□ 1.31
SNX25Q9H3E2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SNX25Q9H3E2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SNX25Q9H3E2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
SNX25Q9H3E2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SNX25Q9H3E2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.22■■□□□ 1.31
SNX25Q9H3E2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.22■■□□□ 1.31
SNX25Q9H3E2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
SNX25Q9H3E2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.2■■□□□ 1.3
SNX25Q9H3E2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms