Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.66■■□□□ 1.38
NUCKS1Q9H1E3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 AL356740.2-201ENST00000601559 647 ntBASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 CA15P2-201ENST00000611168 834 ntBASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
NUCKS1Q9H1E3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NUCKS1Q9H1E3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NUCKS1Q9H1E3 C17orf82-201ENST00000623772 1530 ntBASIC23.64■■□□□ 1.38
NUCKS1Q9H1E3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
NUCKS1Q9H1E3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NUCKS1Q9H1E3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
NUCKS1Q9H1E3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
NUCKS1Q9H1E3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.64■■□□□ 1.37
NUCKS1Q9H1E3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NUCKS1Q9H1E3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.64■■□□□ 1.37
NUCKS1Q9H1E3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
NUCKS1Q9H1E3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NUCKS1Q9H1E3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 AC004687.1-201ENST00000579003 1625 ntBASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.63■■□□□ 1.37
NUCKS1Q9H1E3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 AC131281.2-201ENST00000520478 145 ntBASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.62■■□□□ 1.37
NUCKS1Q9H1E3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.61■■□□□ 1.37
NUCKS1Q9H1E3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.61■■□□□ 1.37
NUCKS1Q9H1E3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.61■■□□□ 1.37
NUCKS1Q9H1E3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.61■■□□□ 1.37
NUCKS1Q9H1E3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.61■■□□□ 1.37
NUCKS1Q9H1E3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NUCKS1Q9H1E3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 FBXW4P1-201ENST00000426721 2239 ntBASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NUCKS1Q9H1E3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
NUCKS1Q9H1E3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 AC008406.3-201ENST00000620001 1374 ntBASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 AL499627.2-201ENST00000606283 725 ntBASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NUCKS1Q9H1E3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
NUCKS1Q9H1E3 AC007375.3-201ENST00000600936 2314 ntBASIC23.58■■□□□ 1.36
NUCKS1Q9H1E3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms