Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF38Q9H0F5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.73■■□□□ 1.23
RNF38Q9H0F5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF38Q9H0F5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.73■■□□□ 1.23
RNF38Q9H0F5 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
RNF38Q9H0F5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
RNF38Q9H0F5 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RNF38Q9H0F5 BX005040.4-201ENST00000637145 1518 ntBASIC22.72■■□□□ 1.23
RNF38Q9H0F5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
RNF38Q9H0F5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.71■■□□□ 1.23
RNF38Q9H0F5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
RNF38Q9H0F5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
RNF38Q9H0F5 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF38Q9H0F5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
RNF38Q9H0F5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF38Q9H0F5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RNF38Q9H0F5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 AC092437.1-201ENST00000624794 1048 ntBASIC22.68■■□□□ 1.22
RNF38Q9H0F5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.68■■□□□ 1.22
RNF38Q9H0F5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RNF38Q9H0F5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 KRT18P61-201ENST00000585825 1298 ntBASIC22.66■■□□□ 1.22
RNF38Q9H0F5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.66■■□□□ 1.22
RNF38Q9H0F5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 LINC01960-201ENST00000563759 1884 ntBASIC22.65■■□□□ 1.22
RNF38Q9H0F5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.65■■□□□ 1.22
RNF38Q9H0F5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF38Q9H0F5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms