Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM2Q9C040 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM2Q9C040 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.03■□□□□ 0.8
TRIM2Q9C040 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM2Q9C040 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM2Q9C040 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM2Q9C040 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRIM2Q9C040 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM2Q9C040 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM2Q9C040 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM2Q9C040 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM2Q9C040 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM2Q9C040 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM2Q9C040 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM2Q9C040 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM2Q9C040 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM2Q9C040 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM2Q9C040 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRIM2Q9C040 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM2Q9C040 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM2Q9C040 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM2Q9C040 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM2Q9C040 LINC00565-201ENST00000562710 2331 ntBASIC20.02■□□□□ 0.79
TRIM2Q9C040 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRIM2Q9C040 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM2Q9C040 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM2Q9C040 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM2Q9C040 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 AL136116.3-201ENST00000402907 1138 ntBASIC20.01■□□□□ 0.79
TRIM2Q9C040 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 CA15P2-201ENST00000611168 834 ntBASIC20.01■□□□□ 0.79
TRIM2Q9C040 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM2Q9C040 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM2Q9C040 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
TRIM2Q9C040 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM2Q9C040 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20■□□□□ 0.79
TRIM2Q9C040 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TRIM2Q9C040 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20■□□□□ 0.79
TRIM2Q9C040 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20■□□□□ 0.79
TRIM2Q9C040 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20■□□□□ 0.79
TRIM2Q9C040 AC099791.2-201ENST00000605725 427 ntBASIC20■□□□□ 0.79
TRIM2Q9C040 pRNA.6-201ENST00000610482 90 ntBASIC20■□□□□ 0.79
TRIM2Q9C040 pRNA.5-201ENST00000612139 90 ntBASIC20■□□□□ 0.79
TRIM2Q9C040 pRNA.11-201ENST00000618423 90 ntBASIC20■□□□□ 0.79
TRIM2Q9C040 pRNA.13-201ENST00000619112 90 ntBASIC20■□□□□ 0.79
TRIM2Q9C040 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20■□□□□ 0.79
TRIM2Q9C040 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20■□□□□ 0.79
TRIM2Q9C040 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20■□□□□ 0.79
TRIM2Q9C040 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TRIM2Q9C040 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM2Q9C040 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM2Q9C040 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM2Q9C040 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM2Q9C040 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM2Q9C040 AC133637.1-201ENST00000624115 1537 ntBASIC19.99■□□□□ 0.79
TRIM2Q9C040 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM2Q9C040 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM2Q9C040 AC006455.2-201ENST00000429931 906 ntBASIC19.99■□□□□ 0.79
TRIM2Q9C040 SRD5A1P1-201ENST00000442297 786 ntBASIC19.99■□□□□ 0.79
TRIM2Q9C040 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM2Q9C040 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM2Q9C040 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms