Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.12■□□□□ 0.65
VRK1Q99986 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.12■□□□□ 0.65
VRK1Q99986 pRNA.6-201ENST00000610482 90 ntBASIC19.12■□□□□ 0.65
VRK1Q99986 pRNA.5-201ENST00000612139 90 ntBASIC19.12■□□□□ 0.65
VRK1Q99986 pRNA.11-201ENST00000618423 90 ntBASIC19.12■□□□□ 0.65
VRK1Q99986 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 pRNA.13-201ENST00000619112 90 ntBASIC19.12■□□□□ 0.65
VRK1Q99986 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
VRK1Q99986 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.12■□□□□ 0.65
VRK1Q99986 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VRK1Q99986 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.11■□□□□ 0.65
VRK1Q99986 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.11■□□□□ 0.65
VRK1Q99986 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VRK1Q99986 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.11■□□□□ 0.65
VRK1Q99986 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.11■□□□□ 0.65
VRK1Q99986 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
VRK1Q99986 AC027682.1-201ENST00000562846 899 ntBASIC19.11■□□□□ 0.65
VRK1Q99986 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.11■□□□□ 0.65
VRK1Q99986 AC136469.2-201ENST00000623944 1028 ntBASIC19.11■□□□□ 0.65
VRK1Q99986 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VRK1Q99986 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VRK1Q99986 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.1■□□□□ 0.65
VRK1Q99986 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VRK1Q99986 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.1■□□□□ 0.65
VRK1Q99986 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.1■□□□□ 0.65
VRK1Q99986 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.1■□□□□ 0.65
VRK1Q99986 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.1■□□□□ 0.65
VRK1Q99986 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.1■□□□□ 0.65
VRK1Q99986 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
VRK1Q99986 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
VRK1Q99986 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
VRK1Q99986 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VRK1Q99986 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.09■□□□□ 0.65
VRK1Q99986 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK1Q99986 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK1Q99986 RASA4CP-201ENST00000424092 1398 ntBASIC19.09■□□□□ 0.65
VRK1Q99986 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.09■□□□□ 0.65
VRK1Q99986 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 AC099791.1-201ENST00000416440 715 ntBASIC19.09■□□□□ 0.65
VRK1Q99986 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 CA15P2-201ENST00000611168 834 ntBASIC19.09■□□□□ 0.65
VRK1Q99986 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.09■□□□□ 0.65
VRK1Q99986 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.09■□□□□ 0.65
VRK1Q99986 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VRK1Q99986 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK1Q99986 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.08■□□□□ 0.65
VRK1Q99986 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK1Q99986 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK1Q99986 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK1Q99986 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK1Q99986 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
VRK1Q99986 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK1Q99986 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
VRK1Q99986 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VRK1Q99986 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VRK1Q99986 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.08■□□□□ 0.64
VRK1Q99986 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VRK1Q99986 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK1Q99986 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.07■□□□□ 0.64
VRK1Q99986 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK1Q99986 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VRK1Q99986 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.07■□□□□ 0.64
VRK1Q99986 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
VRK1Q99986 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK1Q99986 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.07■□□□□ 0.64
VRK1Q99986 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK1Q99986 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VRK1Q99986 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms