Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE1Q99829 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE1Q99829 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE1Q99829 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE1Q99829 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE1Q99829 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE1Q99829 MIR6724-1-201ENST00000616420 92 ntBASIC21.82■■□□□ 1.08
CPNE1Q99829 MIR6724-2-201ENST00000616483 92 ntBASIC21.82■■□□□ 1.08
CPNE1Q99829 MIR6724-4-201ENST00000617390 92 ntBASIC21.82■■□□□ 1.08
CPNE1Q99829 MIR6724-3-201ENST00000622482 92 ntBASIC21.82■■□□□ 1.08
CPNE1Q99829 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CPNE1Q99829 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE1Q99829 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CPNE1Q99829 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.82■■□□□ 1.08
CPNE1Q99829 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPNE1Q99829 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE1Q99829 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE1Q99829 AC010542.4-201ENST00000563151 1910 ntBASIC21.81■■□□□ 1.08
CPNE1Q99829 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE1Q99829 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.81■■□□□ 1.08
CPNE1Q99829 AL451085.2-201ENST00000605085 799 ntBASIC21.81■■□□□ 1.08
CPNE1Q99829 AL117332.1-201ENST00000622628 974 ntBASIC21.81■■□□□ 1.08
CPNE1Q99829 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE1Q99829 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE1Q99829 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.81■■□□□ 1.08
CPNE1Q99829 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CPNE1Q99829 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE1Q99829 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE1Q99829 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CPNE1Q99829 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE1Q99829 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CPNE1Q99829 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE1Q99829 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
CPNE1Q99829 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE1Q99829 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE1Q99829 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.79■■□□□ 1.08
CPNE1Q99829 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE1Q99829 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CPNE1Q99829 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE1Q99829 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CPNE1Q99829 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE1Q99829 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE1Q99829 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE1Q99829 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.78■■□□□ 1.08
CPNE1Q99829 UNC93B8-201ENST00000511903 705 ntBASIC21.78■■□□□ 1.08
CPNE1Q99829 AC241377.3-202ENST00000626088 1088 ntBASIC21.78■■□□□ 1.08
CPNE1Q99829 AC241585.3-202ENST00000628937 1088 ntBASIC21.78■■□□□ 1.08
CPNE1Q99829 AC245100.8-202ENST00000629247 1058 ntBASIC21.78■■□□□ 1.08
CPNE1Q99829 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CPNE1Q99829 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CPNE1Q99829 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE1Q99829 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE1Q99829 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CPNE1Q99829 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE1Q99829 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE1Q99829 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.78■■□□□ 1.08
CPNE1Q99829 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE1Q99829 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CPNE1Q99829 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE1Q99829 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.77■■□□□ 1.08
CPNE1Q99829 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE1Q99829 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE1Q99829 FAM99A-202ENST00000538190 1989 ntBASIC21.77■■□□□ 1.08
CPNE1Q99829 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CPNE1Q99829 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CPNE1Q99829 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.77■■□□□ 1.07
CPNE1Q99829 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE1Q99829 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE1Q99829 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CPNE1Q99829 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE1Q99829 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
CPNE1Q99829 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE1Q99829 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.75■■□□□ 1.07
CPNE1Q99829 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CPNE1Q99829 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CPNE1Q99829 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.75■■□□□ 1.07
CPNE1Q99829 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms