Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS1Q99742 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NPAS1Q99742 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS1Q99742 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.88■□□□□ 0.77
NPAS1Q99742 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS1Q99742 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS1Q99742 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS1Q99742 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS1Q99742 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NPAS1Q99742 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.88■□□□□ 0.77
NPAS1Q99742 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NPAS1Q99742 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
NPAS1Q99742 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS1Q99742 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS1Q99742 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.87■□□□□ 0.77
NPAS1Q99742 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.87■□□□□ 0.77
NPAS1Q99742 AC233992.3-201ENST00000607491 485 ntBASIC19.87■□□□□ 0.77
NPAS1Q99742 AL031602.1-201ENST00000633169 911 ntBASIC19.87■□□□□ 0.77
NPAS1Q99742 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS1Q99742 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS1Q99742 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
NPAS1Q99742 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NPAS1Q99742 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS1Q99742 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NPAS1Q99742 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
NPAS1Q99742 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
NPAS1Q99742 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS1Q99742 AC142381.2-201ENST00000566120 298 ntBASIC19.86■□□□□ 0.77
NPAS1Q99742 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NPAS1Q99742 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NPAS1Q99742 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS1Q99742 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.85■□□□□ 0.77
NPAS1Q99742 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS1Q99742 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS1Q99742 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS1Q99742 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.85■□□□□ 0.77
NPAS1Q99742 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.85■□□□□ 0.77
NPAS1Q99742 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS1Q99742 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.85■□□□□ 0.77
NPAS1Q99742 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS1Q99742 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS1Q99742 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NPAS1Q99742 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.84■□□□□ 0.77
NPAS1Q99742 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPAS1Q99742 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS1Q99742 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.84■□□□□ 0.77
NPAS1Q99742 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS1Q99742 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
NPAS1Q99742 CA15P2-201ENST00000611168 834 ntBASIC19.84■□□□□ 0.77
NPAS1Q99742 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS1Q99742 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS1Q99742 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS1Q99742 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS1Q99742 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS1Q99742 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS1Q99742 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS1Q99742 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS1Q99742 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS1Q99742 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS1Q99742 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS1Q99742 AC027682.1-201ENST00000562846 899 ntBASIC19.83■□□□□ 0.77
NPAS1Q99742 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS1Q99742 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS1Q99742 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS1Q99742 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 AC126544.1-201ENST00000580842 1059 ntBASIC19.82■□□□□ 0.76
NPAS1Q99742 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.82■□□□□ 0.76
NPAS1Q99742 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 AC233723.2-201ENST00000623798 2106 ntBASIC19.82■□□□□ 0.76
NPAS1Q99742 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NPAS1Q99742 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NPAS1Q99742 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.81■□□□□ 0.76
NPAS1Q99742 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
NPAS1Q99742 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS1Q99742 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.81■□□□□ 0.76
NPAS1Q99742 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 AC091305.1-201ENST00000479476 895 ntBASIC19.81■□□□□ 0.76
NPAS1Q99742 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NPAS1Q99742 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NPAS1Q99742 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms