Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF2Q99496 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF2Q99496 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF2Q99496 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF2Q99496 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF2Q99496 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF2Q99496 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF2Q99496 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF2Q99496 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF2Q99496 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF2Q99496 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF2Q99496 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF2Q99496 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF2Q99496 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF2Q99496 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF2Q99496 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.27■□□□□ 0.36
RNF2Q99496 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
RNF2Q99496 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF2Q99496 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF2Q99496 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF2Q99496 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF2Q99496 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF2Q99496 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.27■□□□□ 0.35
RNF2Q99496 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RNF2Q99496 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF2Q99496 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF2Q99496 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RNF2Q99496 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
RNF2Q99496 TSPY9P-201ENST00000440215 945 ntBASIC17.26■□□□□ 0.35
RNF2Q99496 TSPY11P-201ENST00000442607 1045 ntBASIC17.26■□□□□ 0.35
RNF2Q99496 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF2Q99496 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF2Q99496 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.26■□□□□ 0.35
RNF2Q99496 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF2Q99496 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF2Q99496 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF2Q99496 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF2Q99496 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
RNF2Q99496 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
RNF2Q99496 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF2Q99496 OR2A1-AS1-204ENST00000470435 602 ntBASIC17.25■□□□□ 0.35
RNF2Q99496 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RNF2Q99496 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF2Q99496 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF2Q99496 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF2Q99496 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.24■□□□□ 0.35
RNF2Q99496 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF2Q99496 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RNF2Q99496 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF2Q99496 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF2Q99496 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
RNF2Q99496 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF2Q99496 MTDHP2-201ENST00000601468 714 ntBASIC17.24■□□□□ 0.35
RNF2Q99496 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF2Q99496 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF2Q99496 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF2Q99496 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF2Q99496 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RNF2Q99496 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF2Q99496 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF2Q99496 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF2Q99496 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF2Q99496 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF2Q99496 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RNF2Q99496 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF2Q99496 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF2Q99496 MIR6722-201ENST00000617286 78 ntBASIC17.23■□□□□ 0.35
RNF2Q99496 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms