Protein–RNA interactions for Protein: Q96T88

UHRF1, E3 ubiquitin-protein ligase UHRF1, humanhuman

Predicted RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UHRF1Q96T88 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.09■■□□□ 1.29
UHRF1Q96T88 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
UHRF1Q96T88 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
UHRF1Q96T88 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
UHRF1Q96T88 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.09■■□□□ 1.29
UHRF1Q96T88 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
UHRF1Q96T88 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.08■■□□□ 1.29
UHRF1Q96T88 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
UHRF1Q96T88 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
UHRF1Q96T88 FAM210CP-201ENST00000445714 574 ntBASIC23.08■■□□□ 1.29
UHRF1Q96T88 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
UHRF1Q96T88 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.08■■□□□ 1.29
UHRF1Q96T88 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
UHRF1Q96T88 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
UHRF1Q96T88 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UHRF1Q96T88 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UHRF1Q96T88 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
UHRF1Q96T88 AC105036.2-201ENST00000569468 176 ntBASIC23.07■■□□□ 1.28
UHRF1Q96T88 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.07■■□□□ 1.28
UHRF1Q96T88 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
UHRF1Q96T88 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
UHRF1Q96T88 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UHRF1Q96T88 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
UHRF1Q96T88 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
UHRF1Q96T88 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.06■■□□□ 1.28
UHRF1Q96T88 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.06■■□□□ 1.28
UHRF1Q96T88 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
UHRF1Q96T88 BX005040.4-201ENST00000637145 1518 ntBASIC23.06■■□□□ 1.28
UHRF1Q96T88 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
UHRF1Q96T88 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.06■■□□□ 1.28
UHRF1Q96T88 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.06■■□□□ 1.28
UHRF1Q96T88 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.05■■□□□ 1.28
UHRF1Q96T88 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
UHRF1Q96T88 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
UHRF1Q96T88 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 AL139125.2-201ENST00000623134 1869 ntBASIC23.05■■□□□ 1.28
UHRF1Q96T88 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.05■■□□□ 1.28
UHRF1Q96T88 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
UHRF1Q96T88 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
UHRF1Q96T88 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
UHRF1Q96T88 SLC6A10P-202ENST00000431994 2058 ntBASIC23.04■■□□□ 1.28
UHRF1Q96T88 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UHRF1Q96T88 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UHRF1Q96T88 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
UHRF1Q96T88 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 AC142381.4-202ENST00000563973 229 ntBASIC23.04■■□□□ 1.28
UHRF1Q96T88 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 MIR4758-201ENST00000577688 71 ntBASIC23.04■■□□□ 1.28
UHRF1Q96T88 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.04■■□□□ 1.28
UHRF1Q96T88 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
UHRF1Q96T88 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
UHRF1Q96T88 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.04■■□□□ 1.28
UHRF1Q96T88 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.03■■□□□ 1.28
UHRF1Q96T88 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 ECEL1P3-201ENST00000427961 737 ntBASIC23.03■■□□□ 1.28
UHRF1Q96T88 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.03■■□□□ 1.28
UHRF1Q96T88 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
UHRF1Q96T88 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.03■■□□□ 1.28
UHRF1Q96T88 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.03■■□□□ 1.28
UHRF1Q96T88 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.03■■□□□ 1.28
UHRF1Q96T88 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.03■■□□□ 1.28
UHRF1Q96T88 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
UHRF1Q96T88 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UHRF1Q96T88 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
UHRF1Q96T88 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.02■■□□□ 1.28
UHRF1Q96T88 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.02■■□□□ 1.28
UHRF1Q96T88 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
UHRF1Q96T88 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.02■■□□□ 1.28
UHRF1Q96T88 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.02■■□□□ 1.28
UHRF1Q96T88 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UHRF1Q96T88 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.02■■□□□ 1.28
UHRF1Q96T88 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
UHRF1Q96T88 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.02■■□□□ 1.28
UHRF1Q96T88 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UHRF1Q96T88 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
UHRF1Q96T88 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
UHRF1Q96T88 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
UHRF1Q96T88 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
UHRF1Q96T88 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
UHRF1Q96T88 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
UHRF1Q96T88 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
UHRF1Q96T88 RARRES2P4-201ENST00000514074 484 ntBASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms